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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:33.0 nTPM
HPA:33.0 nTPM
GTEx:14.9 nTPM
FANTOM5:17.6 Scaled Tags Per Million
Pig:4.2 nTPM
Mouse:10.2 nTPM
Allen mouse:2.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035437
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.0
Sample id Sample description nTPM
Hippocampus
nTPM: 31.9
1898 Male, age 80, left hemisphere 33.2
2148 Female, age 91, left hemisphere 32.5
2529 Female, age 94, left hemisphere 31.8
2621 Female, age 67, right hemisphere 31.6
1911 Female, age 85, right hemisphere 31.2
1855 Male, age 76, left hemisphere 31.0
Dentate gyrus
nTPM: 31.8
2528 Male, age 74, both hemispheres 34.3
2530 Female, age 94, left hemisphere 32.0
2531 Female, age 67, both hemispheres 31.4
1927 Female, age 91, both hemispheres 31.2
2010 Male, age 76, both hemispheres 31.1
2246 Female, age 85, both hemispheres 30.6
Entorhinal gyrus
nTPM: 33.0
2764 Male, age 80, right hemisphere 35.0
2117 Female, age 91, right hemisphere 33.4
1938 Female, age 85, left hemisphere 33.2
2613 Female, age 94, left hemisphere 32.8
1787 Male, age 76, left hemisphere 32.4
2686 Male, age 75, right hemisphere 31.2
Hippocampus, CA1
nTPM: 31.3
2527 Male, age 74, both hemispheres 32.6
1873 Female, age 85, both hemispheres 32.0
2082 Female, age 91, right hemisphere 31.5
2045 Male, age 76, both hemispheres 31.4
2749 Male, age 80, left hemisphere 28.9
Hippocampus, CA2
nTPM: 31.9
2249 Male, age 74, both hemispheres 33.6
2113 Female, age 91, right hemisphere 32.1
2437 Female, age 94, left hemisphere 32.1
1940 Female, age 85, left hemisphere 31.4
1963 Male, age 80, left hemisphere 31.3
1892 Male, age 76, both hemispheres 30.8
Hippocampus, CA3
nTPM: 32.3
2436 Male, age 74, both hemispheres 34.8
2620 Female, age 94, left hemisphere 34.1
1891 Female, age 85, both hemispheres 32.2
1867 Male, age 76, both hemispheres 31.6
2861 Female, age 67, both hemispheres 31.5
2137 Male, age 80, left hemisphere 29.9
Parahippocampal cortex
nTPM: 32.1
1850 Male, age 80, both hemispheres 33.0
1933 Female, age 85, both hemispheres 33.0
2532 Female, age 72, left hemisphere 32.4
2018 Male, age 76, both hemispheres 32.2
1990 Female, age 91, right hemisphere 32.1
2622 Female, age 67, right hemisphere 32.0
2693 Female, age 94, both hemispheres 31.9
2245 Female, age 91, both hemispheres 31.8
2692 Male, age 74, both hemispheres 31.5
2250 Female, age 67, right hemisphere 31.3
Perirhinal gyrus
nTPM: 32.3
1794 Male, age 80, right hemisphere 33.2
1847 Female, age 91, left hemisphere 32.9
2848 Male, age 76, right hemisphere 32.7
1841 Female, age 85, right hemisphere 32.0
2521 Female, age 94, right hemisphere 30.8
Subiculum
nTPM: 32.2
2619 Male, age 74, both hemispheres 33.9
2729 Female, age 91, right hemisphere 33.4
1977 Female, age 85, both hemispheres 32.4
2438 Female, age 94, left hemisphere 31.5
1901 Male, age 80, both hemispheres 31.0
2042 Male, age 76, both hemispheres 31.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 14.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.9
Samples: 197

Max nTPM: 47.7
Min nTPM: 2.2
Std nTPM: 6.8
Median nTPM: 13.9
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 47.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 39.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 34.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 34.3
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 33.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 31.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 31.8
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 31.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 29.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 28.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 28.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.6
FF:10153-102I9 76 years, female 18.4
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.2
Samples: 4

Max nTPM: 6.0
Min nTPM: 2.8
Sample A Female 6.0
Sample B Female 3.1
Sample C Male 4.9
Sample D Male 2.8
Entorhinal cortex
nTPM: 3.3
Samples: 4

Max nTPM: 4.0
Min nTPM: 2.5
Sample A Female 4.0
Sample B Female 3.7
Sample C Male 3.1
Sample D Male 2.5
Subiculum
nTPM: 3.5
Samples: 4

Max nTPM: 4.6
Min nTPM: 2.8
Sample A Female 4.6
Sample B Female 3.1
Sample C Male 3.4
Sample D Male 2.8
Ventral hippocampus
nTPM: 4.3
Samples: 4

Max nTPM: 5.2
Min nTPM: 2.8
Sample A Female 5.2
Sample B Female 2.8
Sample C Male 4.7
Sample D Male 4.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.2
Samples: 4

Max nTPM: 11.7
Min nTPM: 8.7
Sample A Male 10.5
Sample B Male 8.7
Sample C Female 9.8
Sample D Female 11.7
Hippocampal formation
nTPM: 9.8
Samples: 4

Max nTPM: 10.8
Min nTPM: 9.0
Sample A Male 10.8
Sample B Male 9.0
Sample C Female 9.1
Sample D Female 10.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.5
68302323 Antisense, RP_041130_02_F05, Mouse strain C57BL/6J (56 days, male) 2.5

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The Human Protein Atlas

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