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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:44.0 nTPM
HPA:44.0 nTPM
GTEx:23.1 nTPM
FANTOM5:32.5 Scaled Tags Per Million
Pig:14.0 nTPM
Mouse:56.2 nTPM
Allen mouse:10.1 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 44.0
Sample id Sample description nTPM
Amygdala
nTPM: 42.6
2695 Female, age 67, right hemisphere 44.2
2814 Male, age 76, right hemisphere 43.0
2517 Female, age 94, left hemisphere 42.8
1987 Female, age 91, left hemisphere 42.1
2514 Male, age 75, right hemisphere 40.7
Basal amygdala
nTPM: 42.7
2110 Male, age 80, left hemisphere 44.5
2609 Male, age 75, right hemisphere 44.5
2243 Female, age 91, right hemisphere 43.0
2685 Female, age 94, left hemisphere 42.3
2827 Female, age 67, right hemisphere 42.0
1955 Male, age 76, both hemispheres 40.1
Central amygdala
nTPM: 44.0
2515 Male, age 75, right hemisphere 45.5
2826 Female, age 94, left hemisphere 45.3
1905 Male, age 76, both hemispheres 44.6
2239 Male, age 80, left hemisphere 43.0
2701 Female, age 91, right hemisphere 41.7
Corticomedial amygdala
nTPM: 42.2
2428 Male, age 75, right hemisphere 45.8
2829 Male, age 80, left hemisphere 44.4
2242 Female, age 91, right hemisphere 41.7
2535 Female, age 67, right hemisphere 41.2
2240 Male, age 76, both hemispheres 40.2
2429 Female, age 94, left hemisphere 40.0
Lateral amygdala
nTPM: 43.2
2516 Male, age 75, right hemisphere 45.8
2830 Female, age 67, right hemisphere 43.9
2255 Female, age 91, right hemisphere 43.4
2534 Female, age 94, left hemisphere 43.0
1883 Male, age 76, both hemispheres 42.0
2256 Male, age 80, left hemisphere 41.3
Stria terminalis, bed nucleus
nTPM: 42.0
1974 Female, age 91, both hemispheres 42.6
2486 Female, age 94, both hemispheres 42.2
2201 Male, age 74, unknown 41.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 23.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 23.1
Samples: 152

Max nTPM: 49.5
Min nTPM: 9.0
Std nTPM: 7.8
Median nTPM: 22.2
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 49.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 45.1
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 40.8
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 40.7
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 39.7
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 38.4
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 38.4
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 35.7
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 35.4
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 34.7
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 34.1
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 32.5
FF:10151-102I7 76 years, female 32.5

AMYGDALA - Pig RNA-seqi
Average nTPM 14.0
Pig sample Sample description nTPM
Amygdala
nTPM: 14.0
Samples: 4

Max nTPM: 17.8
Min nTPM: 11.4
Sample A Female 17.8
Sample B Female 11.4
Sample C Male 14.3
Sample D Male 12.3

AMYGDALA - Mouse RNA-seqi
Average nTPM 56.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 56.2
Samples: 4

Max nTPM: 58.3
Min nTPM: 53.7
Sample A Male 58.3
Sample B Male 53.7
Sample C Female 57.6
Sample D Female 55.2

AMYGDALA - Allen Mouse ISHi
Max Expression energy 10.1
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 10.1
69080067 Antisense, RP_050324_01_H06, Mouse strain C57BL/6J (56 days, male) 10.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.