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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:45.7 nTPM
HPA:45.7 nTPM
GTEx:24.1 nTPM
FANTOM5:42.8 Scaled Tags Per Million
Pig:18.7 nTPM
Mouse:57.5 nTPM
Allen mouse:10.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010551
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.7
Sample id Sample description nTPM
Hippocampus
nTPM: 42.6
1898 Male, age 80, left hemisphere 45.1
2529 Female, age 94, left hemisphere 42.8
2148 Female, age 91, left hemisphere 42.7
1855 Male, age 76, left hemisphere 41.9
2621 Female, age 67, right hemisphere 41.6
1911 Female, age 85, right hemisphere 41.1
Dentate gyrus
nTPM: 42.4
2530 Female, age 94, left hemisphere 44.2
1927 Female, age 91, both hemispheres 43.1
2528 Male, age 74, both hemispheres 42.8
2010 Male, age 76, both hemispheres 41.9
2531 Female, age 67, both hemispheres 41.9
2246 Female, age 85, both hemispheres 40.8
Entorhinal gyrus
nTPM: 43.5
2764 Male, age 80, right hemisphere 45.6
1787 Male, age 76, left hemisphere 43.9
1938 Female, age 85, left hemisphere 43.5
2117 Female, age 91, right hemisphere 43.0
2686 Male, age 75, right hemisphere 43.0
2613 Female, age 94, left hemisphere 42.0
Hippocampus, CA1
nTPM: 45.7
2749 Male, age 80, left hemisphere 55.5
2045 Male, age 76, both hemispheres 44.2
1873 Female, age 85, both hemispheres 43.2
2527 Male, age 74, both hemispheres 43.1
2082 Female, age 91, right hemisphere 42.3
Hippocampus, CA2
nTPM: 43.2
1963 Male, age 80, left hemisphere 47.3
1892 Male, age 76, both hemispheres 44.1
2113 Female, age 91, right hemisphere 42.7
1940 Female, age 85, left hemisphere 41.9
2249 Male, age 74, both hemispheres 41.9
2437 Female, age 94, left hemisphere 41.5
Hippocampus, CA3
nTPM: 44.6
2137 Male, age 80, left hemisphere 52.1
2620 Female, age 94, left hemisphere 44.7
1867 Male, age 76, both hemispheres 44.0
2436 Male, age 74, both hemispheres 43.0
2861 Female, age 67, both hemispheres 42.4
1891 Female, age 85, both hemispheres 41.5
Parahippocampal cortex
nTPM: 42.3
1933 Female, age 85, both hemispheres 43.8
1850 Male, age 80, both hemispheres 43.7
2245 Female, age 91, both hemispheres 43.0
2622 Female, age 67, right hemisphere 42.9
1990 Female, age 91, right hemisphere 42.8
2018 Male, age 76, both hemispheres 41.6
2692 Male, age 74, both hemispheres 41.5
2693 Female, age 94, both hemispheres 41.4
2532 Female, age 72, left hemisphere 41.3
2250 Female, age 67, right hemisphere 40.7
Perirhinal gyrus
nTPM: 43.5
1794 Male, age 80, right hemisphere 46.6
1847 Female, age 91, left hemisphere 45.3
2848 Male, age 76, right hemisphere 42.6
1841 Female, age 85, right hemisphere 41.9
2521 Female, age 94, right hemisphere 41.1
Subiculum
nTPM: 42.1
1901 Male, age 80, both hemispheres 44.1
2619 Male, age 74, both hemispheres 44.1
2729 Female, age 91, right hemisphere 44.1
1977 Female, age 85, both hemispheres 42.4
2042 Male, age 76, both hemispheres 42.1
2438 Female, age 94, left hemisphere 35.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.1
Samples: 197

Max nTPM: 51.0
Min nTPM: 5.7
Std nTPM: 7.6
Median nTPM: 23.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 51.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 43.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 43.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 43.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 41.5
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 41.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 39.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 39.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 39.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 38.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 38.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 42.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 42.8
FF:10169-103B7 60 years, female 55.4
FF:10153-102I9 76 years, female 30.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.5
Samples: 4

Max nTPM: 24.6
Min nTPM: 15.1
Sample A Female 24.6
Sample B Female 18.7
Sample C Male 15.5
Sample D Male 15.1
Entorhinal cortex
nTPM: 17.7
Samples: 4

Max nTPM: 20.2
Min nTPM: 15.5
Sample A Female 17.9
Sample B Female 17.3
Sample C Male 20.2
Sample D Male 15.5
Subiculum
nTPM: 17.1
Samples: 4

Max nTPM: 23.4
Min nTPM: 14.3
Sample A Female 23.4
Sample B Female 14.3
Sample C Male 16.4
Sample D Male 14.4
Ventral hippocampus
nTPM: 18.7
Samples: 4

Max nTPM: 23.0
Min nTPM: 12.8
Sample A Female 19.4
Sample B Female 12.8
Sample C Male 23.0
Sample D Male 19.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 57.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 51.3
Samples: 4

Max nTPM: 58.3
Min nTPM: 42.6
Sample A Male 50.9
Sample B Male 53.2
Sample C Female 58.3
Sample D Female 42.6
Hippocampal formation
nTPM: 57.5
Samples: 4

Max nTPM: 64.2
Min nTPM: 50.4
Sample A Male 62.0
Sample B Male 50.4
Sample C Female 53.5
Sample D Female 64.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.6
69080067 Antisense, RP_050324_01_H06, Mouse strain C57BL/6J (56 days, male) 10.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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