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REPIN1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:37.9 nTPM
HPA:37.9 nTPM
GTEx:41.2 nTPM
FANTOM5:32.9 Scaled Tags Per Million
Pig:14.3 nTPM
Mouse:10.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036022
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 37.9
Sample id Sample description nTPM
Hippocampus
nTPM: 37.7
2529 Female, age 94, left hemisphere 45.4
2621 Female, age 67, right hemisphere 40.7
2148 Female, age 91, left hemisphere 39.8
1911 Female, age 85, right hemisphere 34.1
1855 Male, age 76, left hemisphere 33.2
1898 Male, age 80, left hemisphere 32.9
Dentate gyrus
nTPM: 37.9
2530 Female, age 94, left hemisphere 45.9
2531 Female, age 67, both hemispheres 44.0
2528 Male, age 74, both hemispheres 36.2
2246 Female, age 85, both hemispheres 34.3
2010 Male, age 76, both hemispheres 34.2
1927 Female, age 91, both hemispheres 33.0
Entorhinal gyrus
nTPM: 36.4
2613 Female, age 94, left hemisphere 40.5
2117 Female, age 91, right hemisphere 39.0
2686 Male, age 75, right hemisphere 37.6
2764 Male, age 80, right hemisphere 36.6
1787 Male, age 76, left hemisphere 33.2
1938 Female, age 85, left hemisphere 31.7
Hippocampus, CA1
nTPM: 32.4
2082 Female, age 91, right hemisphere 36.8
2527 Male, age 74, both hemispheres 35.9
2045 Male, age 76, both hemispheres 30.5
1873 Female, age 85, both hemispheres 30.4
2749 Male, age 80, left hemisphere 28.4
Hippocampus, CA2
nTPM: 36.8
1963 Male, age 80, left hemisphere 43.5
2437 Female, age 94, left hemisphere 40.7
1940 Female, age 85, left hemisphere 36.1
2113 Female, age 91, right hemisphere 35.9
2249 Male, age 74, both hemispheres 34.9
1892 Male, age 76, both hemispheres 29.9
Hippocampus, CA3
nTPM: 36.8
2861 Female, age 67, both hemispheres 49.7
2436 Male, age 74, both hemispheres 41.0
2620 Female, age 94, left hemisphere 41.0
1891 Female, age 85, both hemispheres 32.0
1867 Male, age 76, both hemispheres 28.9
2137 Male, age 80, left hemisphere 28.0
Parahippocampal cortex
nTPM: 33.2
2622 Female, age 67, right hemisphere 42.4
2532 Female, age 72, left hemisphere 37.2
2692 Male, age 74, both hemispheres 36.6
2245 Female, age 91, both hemispheres 34.8
1990 Female, age 91, right hemisphere 32.2
2018 Male, age 76, both hemispheres 32.1
2250 Female, age 67, right hemisphere 30.4
1933 Female, age 85, both hemispheres 29.8
2693 Female, age 94, both hemispheres 29.0
1850 Male, age 80, both hemispheres 27.9
Perirhinal gyrus
nTPM: 30.0
1794 Male, age 80, right hemisphere 32.6
2848 Male, age 76, right hemisphere 30.5
2521 Female, age 94, right hemisphere 30.2
1841 Female, age 85, right hemisphere 29.3
1847 Female, age 91, left hemisphere 27.3
Subiculum
nTPM: 33.9
2619 Male, age 74, both hemispheres 36.9
2729 Female, age 91, right hemisphere 36.6
2438 Female, age 94, left hemisphere 34.6
1977 Female, age 85, both hemispheres 33.6
2042 Male, age 76, both hemispheres 31.1
1901 Male, age 80, both hemispheres 30.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.2
Samples: 197

Max nTPM: 76.6
Min nTPM: 22.7
Std nTPM: 8.3
Median nTPM: 40.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 76.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 70.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 62.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 61.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 60.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 59.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 57.8
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 56.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 55.6
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 55.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 54.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.9
FF:10153-102I9 76 years, female 42.9
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.5
Samples: 4

Max nTPM: 16.5
Min nTPM: 10.8
Sample A Female 16.5
Sample B Female 13.3
Sample C Male 13.2
Sample D Male 10.8
Entorhinal cortex
nTPM: 13.7
Samples: 4

Max nTPM: 16.2
Min nTPM: 11.1
Sample A Female 14.3
Sample B Female 13.1
Sample C Male 16.2
Sample D Male 11.1
Subiculum
nTPM: 13.2
Samples: 4

Max nTPM: 18.7
Min nTPM: 10.7
Sample A Female 18.7
Sample B Female 11.3
Sample C Male 12.1
Sample D Male 10.7
Ventral hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 19.7
Min nTPM: 10.9
Sample A Female 14.6
Sample B Female 10.9
Sample C Male 19.7
Sample D Male 12.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 11.5
Min nTPM: 8.9
Sample A Male 11.4
Sample B Male 11.5
Sample C Female 9.8
Sample D Female 8.9
Hippocampal formation
nTPM: 9.9
Samples: 4

Max nTPM: 10.2
Min nTPM: 9.4
Sample A Male 9.9
Sample B Male 10.2
Sample C Female 9.4
Sample D Female 10.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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