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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:28.2 nTPM
HPA:28.2 nTPM
GTEx:45.2 nTPM
FANTOM5:21.7 Scaled Tags Per Million
Pig:5.9 nTPM
Mouse:0.2 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006655
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.2
Sample id Sample description nTPM
Hippocampus
nTPM: 25.3
2621 Female, age 67, right hemisphere 27.9
1898 Male, age 80, left hemisphere 26.4
2529 Female, age 94, left hemisphere 25.4
1855 Male, age 76, left hemisphere 25.1
1911 Female, age 85, right hemisphere 24.9
2148 Female, age 91, left hemisphere 22.3
Dentate gyrus
nTPM: 26.3
2531 Female, age 67, both hemispheres 28.4
2246 Female, age 85, both hemispheres 27.3
2010 Male, age 76, both hemispheres 26.9
2530 Female, age 94, left hemisphere 26.4
1927 Female, age 91, both hemispheres 26.0
2528 Male, age 74, both hemispheres 22.7
Entorhinal gyrus
nTPM: 27.2
1938 Female, age 85, left hemisphere 30.6
1787 Male, age 76, left hemisphere 29.1
2764 Male, age 80, right hemisphere 28.4
2613 Female, age 94, left hemisphere 28.3
2686 Male, age 75, right hemisphere 24.6
2117 Female, age 91, right hemisphere 21.9
Hippocampus, CA1
nTPM: 27.1
2749 Male, age 80, left hemisphere 32.4
2082 Female, age 91, right hemisphere 27.6
1873 Female, age 85, both hemispheres 26.2
2045 Male, age 76, both hemispheres 25.4
2527 Male, age 74, both hemispheres 24.1
Hippocampus, CA2
nTPM: 26.6
1892 Male, age 76, both hemispheres 30.2
1963 Male, age 80, left hemisphere 28.0
2249 Male, age 74, both hemispheres 27.0
2437 Female, age 94, left hemisphere 25.1
2113 Female, age 91, right hemisphere 24.8
1940 Female, age 85, left hemisphere 24.6
Hippocampus, CA3
nTPM: 26.8
2137 Male, age 80, left hemisphere 28.9
2436 Male, age 74, both hemispheres 27.7
1867 Male, age 76, both hemispheres 27.4
2861 Female, age 67, both hemispheres 27.2
2620 Female, age 94, left hemisphere 25.1
1891 Female, age 85, both hemispheres 24.3
Parahippocampal cortex
nTPM: 26.7
2250 Female, age 67, right hemisphere 29.4
1933 Female, age 85, both hemispheres 29.0
2018 Male, age 76, both hemispheres 27.8
1850 Male, age 80, both hemispheres 27.2
1990 Female, age 91, right hemisphere 27.0
2245 Female, age 91, both hemispheres 27.0
2532 Female, age 72, left hemisphere 26.9
2693 Female, age 94, both hemispheres 26.2
2622 Female, age 67, right hemisphere 24.1
2692 Male, age 74, both hemispheres 22.9
Perirhinal gyrus
nTPM: 28.2
1847 Female, age 91, left hemisphere 32.2
2848 Male, age 76, right hemisphere 29.0
1794 Male, age 80, right hemisphere 27.5
1841 Female, age 85, right hemisphere 27.4
2521 Female, age 94, right hemisphere 25.0
Subiculum
nTPM: 25.1
1977 Female, age 85, both hemispheres 31.7
1901 Male, age 80, both hemispheres 25.2
2042 Male, age 76, both hemispheres 24.7
2619 Male, age 74, both hemispheres 23.4
2729 Female, age 91, right hemisphere 23.3
2438 Female, age 94, left hemisphere 22.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.2
Samples: 197

Max nTPM: 145.5
Min nTPM: 8.2
Std nTPM: 22.7
Median nTPM: 41.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 145.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 141.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 125.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 120.9
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 115.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 108.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 104.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 97.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 92.3
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 91.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 89.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.7
FF:10169-103B7 60 years, female 28.2
FF:10153-102I9 76 years, female 15.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.1
Samples: 4

Max nTPM: 9.1
Min nTPM: 2.1
Sample A Female 9.1
Sample B Female 4.4
Sample C Male 4.7
Sample D Male 2.1
Entorhinal cortex
nTPM: 3.4
Samples: 4

Max nTPM: 4.7
Min nTPM: 2.2
Sample A Female 3.4
Sample B Female 4.7
Sample C Male 2.2
Sample D Male 3.1
Subiculum
nTPM: 5.6
Samples: 4

Max nTPM: 7.0
Min nTPM: 4.1
Sample A Female 6.0
Sample B Female 5.3
Sample C Male 7.0
Sample D Male 4.1
Ventral hippocampus
nTPM: 5.9
Samples: 4

Max nTPM: 7.6
Min nTPM: 4.1
Sample A Female 7.6
Sample B Female 5.3
Sample C Male 6.6
Sample D Male 4.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.1
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.0
Sample A Male 0.5
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.3
Samples: 4

Max nTPM: 0.7
Min nTPM: 0.0
Sample A Male 0.7
Sample B Male 0.4
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
70566005 Antisense, RP_050628_02_A08, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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