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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:2.9 nTPM
HPA:2.9 nTPM
GTEx:32.9 nTPM
FANTOM5:68.4 Scaled Tags Per Million
Mouse:13.7 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007066
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 2.9
Sample id Sample description nTPM
Hippocampus
nTPM: 2.3
1898 Male, age 80, left hemisphere 3.3
2529 Female, age 94, left hemisphere 2.9
2621 Female, age 67, right hemisphere 2.8
1855 Male, age 76, left hemisphere 2.2
1911 Female, age 85, right hemisphere 1.8
2148 Female, age 91, left hemisphere 0.8
Dentate gyrus
nTPM: 2.0
1927 Female, age 91, both hemispheres 2.4
2531 Female, age 67, both hemispheres 2.4
2010 Male, age 76, both hemispheres 2.1
2528 Male, age 74, both hemispheres 2.0
2530 Female, age 94, left hemisphere 1.5
2246 Female, age 85, both hemispheres 1.3
Entorhinal gyrus
nTPM: 1.4
2117 Female, age 91, right hemisphere 2.3
1938 Female, age 85, left hemisphere 2.2
1787 Male, age 76, left hemisphere 1.7
2764 Male, age 80, right hemisphere 0.9
2613 Female, age 94, left hemisphere 0.6
2686 Male, age 75, right hemisphere 0.5
Hippocampus, CA1
nTPM: 2.9
2749 Male, age 80, left hemisphere 5.2
2082 Female, age 91, right hemisphere 3.2
1873 Female, age 85, both hemispheres 2.9
2527 Male, age 74, both hemispheres 1.8
2045 Male, age 76, both hemispheres 1.7
Hippocampus, CA2
nTPM: 2.6
1963 Male, age 80, left hemisphere 4.0
2113 Female, age 91, right hemisphere 2.9
2249 Male, age 74, both hemispheres 2.4
2437 Female, age 94, left hemisphere 2.2
1940 Female, age 85, left hemisphere 2.1
1892 Male, age 76, both hemispheres 1.7
Hippocampus, CA3
nTPM: 1.7
2861 Female, age 67, both hemispheres 2.4
1867 Male, age 76, both hemispheres 1.9
2620 Female, age 94, left hemisphere 1.8
2137 Male, age 80, left hemisphere 1.4
1891 Female, age 85, both hemispheres 1.3
2436 Male, age 74, both hemispheres 1.2
Parahippocampal cortex
nTPM: 1.4
2622 Female, age 67, right hemisphere 2.0
1933 Female, age 85, both hemispheres 1.7
2693 Female, age 94, both hemispheres 1.7
2692 Male, age 74, both hemispheres 1.5
1990 Female, age 91, right hemisphere 1.3
2018 Male, age 76, both hemispheres 1.3
1850 Male, age 80, both hemispheres 1.1
2250 Female, age 67, right hemisphere 1.1
2532 Female, age 72, left hemisphere 1.0
2245 Female, age 91, both hemispheres 0.9
Perirhinal gyrus
nTPM: 1.8
1794 Male, age 80, right hemisphere 2.4
1841 Female, age 85, right hemisphere 2.2
2848 Male, age 76, right hemisphere 1.7
1847 Female, age 91, left hemisphere 1.5
2521 Female, age 94, right hemisphere 1.4
Subiculum
nTPM: 1.3
1901 Male, age 80, both hemispheres 2.5
1977 Female, age 85, both hemispheres 1.9
2042 Male, age 76, both hemispheres 1.7
2729 Female, age 91, right hemisphere 1.1
2619 Male, age 74, both hemispheres 0.7
2438 Female, age 94, left hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.9
Samples: 197

Max nTPM: 53.9
Min nTPM: 13.4
Std nTPM: 7.4
Median nTPM: 32.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 53.9
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 51.9
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 49.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 48.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 48.5
GTEX-17F97-0011-R1b-SM-7IGM9 50-59 years, male 48.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 47.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 47.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 47.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 46.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 46.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.4
FF:10153-102I9 76 years, female 88.7
FF:10169-103B7 60 years, female 48.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.7
Samples: 4

Max nTPM: 15.2
Min nTPM: 12.6
Sample A Male 15.2
Sample B Male 13.0
Sample C Female 12.6
Sample D Female 13.9
Hippocampal formation
nTPM: 13.1
Samples: 4

Max nTPM: 14.4
Min nTPM: 12.2
Sample A Male 12.2
Sample B Male 13.5
Sample C Female 12.2
Sample D Female 14.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
69112405 Antisense, RP_050324_02_G06, Mouse strain C57BL/6J (56 days, male) 2.0
70919185 Antisense, RP_050712_04_D02, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.