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LYRM9
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:35.8 nTPM
HPA:35.8 nTPM
GTEx:58.1 nTPM
FANTOM5:51.8 Scaled Tags Per Million
Pig:8.6 nTPM
Mouse:13.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023051
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.8
Sample id Sample description nTPM
Hippocampus
nTPM: 29.8
1855 Male, age 76, left hemisphere 33.7
1898 Male, age 80, left hemisphere 32.9
2621 Female, age 67, right hemisphere 28.5
2529 Female, age 94, left hemisphere 28.0
1911 Female, age 85, right hemisphere 27.9
2148 Female, age 91, left hemisphere 27.9
Dentate gyrus
nTPM: 31.3
2530 Female, age 94, left hemisphere 34.7
2531 Female, age 67, both hemispheres 34.4
2246 Female, age 85, both hemispheres 31.4
1927 Female, age 91, both hemispheres 31.2
2010 Male, age 76, both hemispheres 30.3
2528 Male, age 74, both hemispheres 25.8
Entorhinal gyrus
nTPM: 31.7
2613 Female, age 94, left hemisphere 36.9
2764 Male, age 80, right hemisphere 36.9
1787 Male, age 76, left hemisphere 31.9
1938 Female, age 85, left hemisphere 31.0
2686 Male, age 75, right hemisphere 30.7
2117 Female, age 91, right hemisphere 22.8
Hippocampus, CA1
nTPM: 33.2
2749 Male, age 80, left hemisphere 41.6
2045 Male, age 76, both hemispheres 39.6
1873 Female, age 85, both hemispheres 30.7
2082 Female, age 91, right hemisphere 28.1
2527 Male, age 74, both hemispheres 25.8
Hippocampus, CA2
nTPM: 30.1
1892 Male, age 76, both hemispheres 35.2
1963 Male, age 80, left hemisphere 31.7
2437 Female, age 94, left hemisphere 31.2
2113 Female, age 91, right hemisphere 28.2
1940 Female, age 85, left hemisphere 27.6
2249 Male, age 74, both hemispheres 26.8
Hippocampus, CA3
nTPM: 30.1
2137 Male, age 80, left hemisphere 35.1
2861 Female, age 67, both hemispheres 33.7
1867 Male, age 76, both hemispheres 30.8
2620 Female, age 94, left hemisphere 29.6
1891 Female, age 85, both hemispheres 26.6
2436 Male, age 74, both hemispheres 24.7
Parahippocampal cortex
nTPM: 30.4
1850 Male, age 80, both hemispheres 34.0
1933 Female, age 85, both hemispheres 32.9
2622 Female, age 67, right hemisphere 32.0
2245 Female, age 91, both hemispheres 31.3
2018 Male, age 76, both hemispheres 31.1
2532 Female, age 72, left hemisphere 30.7
2693 Female, age 94, both hemispheres 30.0
1990 Female, age 91, right hemisphere 28.3
2692 Male, age 74, both hemispheres 27.1
2250 Female, age 67, right hemisphere 26.1
Perirhinal gyrus
nTPM: 35.8
2848 Male, age 76, right hemisphere 38.8
1794 Male, age 80, right hemisphere 36.9
1841 Female, age 85, right hemisphere 36.1
1847 Female, age 91, left hemisphere 35.0
2521 Female, age 94, right hemisphere 32.2
Subiculum
nTPM: 27.8
2438 Female, age 94, left hemisphere 33.9
1977 Female, age 85, both hemispheres 30.9
1901 Male, age 80, both hemispheres 27.7
2729 Female, age 91, right hemisphere 26.5
2619 Male, age 74, both hemispheres 24.9
2042 Male, age 76, both hemispheres 22.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.1
Samples: 197

Max nTPM: 174.5
Min nTPM: 8.3
Std nTPM: 27.7
Median nTPM: 56.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 174.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 159.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 144.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 123.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 118.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 117.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 113.6
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 110.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 109.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 109.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 107.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.8
FF:10169-103B7 60 years, female 71.1
FF:10153-102I9 76 years, female 32.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.1
Samples: 4

Max nTPM: 8.9
Min nTPM: 7.7
Sample A Female 7.7
Sample B Female 8.9
Sample C Male 7.7
Sample D Male 8.1
Entorhinal cortex
nTPM: 7.6
Samples: 4

Max nTPM: 8.8
Min nTPM: 6.2
Sample A Female 6.2
Sample B Female 8.5
Sample C Male 6.8
Sample D Male 8.8
Subiculum
nTPM: 8.7
Samples: 4

Max nTPM: 10.3
Min nTPM: 7.8
Sample A Female 7.9
Sample B Female 10.3
Sample C Male 8.6
Sample D Male 7.8
Ventral hippocampus
nTPM: 7.9
Samples: 4

Max nTPM: 8.8
Min nTPM: 6.4
Sample A Female 6.4
Sample B Female 8.8
Sample C Male 8.7
Sample D Male 7.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.6
Samples: 4

Max nTPM: 18.1
Min nTPM: 9.3
Sample A Male 11.9
Sample B Male 15.0
Sample C Female 9.3
Sample D Female 18.1
Hippocampal formation
nTPM: 10.1
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.8
Sample A Male 12.7
Sample B Male 8.8
Sample C Female 9.0
Sample D Female 9.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
73497732 Antisense, RP_051121_01_E11, Mouse strain C57BL/6J (56 days, male) 0.0

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