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SMIM27
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:22.4 nTPM
HPA:22.4 nTPM
GTEx:22.5 nTPM
FANTOM5:20.0 Scaled Tags Per Million

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.4
Sample id Sample description nTPM
Hippocampus
nTPM: 21.6
1855 Male, age 76, left hemisphere 22.7
1911 Female, age 85, right hemisphere 22.2
2148 Female, age 91, left hemisphere 21.9
2529 Female, age 94, left hemisphere 21.4
1898 Male, age 80, left hemisphere 20.8
2621 Female, age 67, right hemisphere 20.8
Dentate gyrus
nTPM: 22.1
2010 Male, age 76, both hemispheres 23.1
2531 Female, age 67, both hemispheres 22.9
2246 Female, age 85, both hemispheres 22.8
2530 Female, age 94, left hemisphere 21.9
1927 Female, age 91, both hemispheres 21.2
2528 Male, age 74, both hemispheres 20.8
Entorhinal gyrus
nTPM: 22.1
1938 Female, age 85, left hemisphere 22.4
2117 Female, age 91, right hemisphere 22.4
2613 Female, age 94, left hemisphere 22.1
2764 Male, age 80, right hemisphere 22.1
1787 Male, age 76, left hemisphere 21.9
2686 Male, age 75, right hemisphere 21.5
Hippocampus, CA1
nTPM: 22.4
2045 Male, age 76, both hemispheres 23.1
2082 Female, age 91, right hemisphere 22.6
2749 Male, age 80, left hemisphere 22.6
1873 Female, age 85, both hemispheres 21.8
2527 Male, age 74, both hemispheres 21.7
Hippocampus, CA2
nTPM: 21.8
1892 Male, age 76, both hemispheres 22.5
2113 Female, age 91, right hemisphere 22.5
2437 Female, age 94, left hemisphere 21.8
2249 Male, age 74, both hemispheres 21.6
1940 Female, age 85, left hemisphere 21.3
1963 Male, age 80, left hemisphere 21.3
Hippocampus, CA3
nTPM: 22.4
2620 Female, age 94, left hemisphere 24.6
1867 Male, age 76, both hemispheres 23.5
1891 Female, age 85, both hemispheres 22.7
2137 Male, age 80, left hemisphere 22.5
2436 Male, age 74, both hemispheres 21.2
2861 Female, age 67, both hemispheres 20.1
Parahippocampal cortex
nTPM: 22.3
2532 Female, age 72, left hemisphere 23.8
2622 Female, age 67, right hemisphere 23.3
2692 Male, age 74, both hemispheres 23.0
1850 Male, age 80, both hemispheres 22.5
2250 Female, age 67, right hemisphere 22.3
2693 Female, age 94, both hemispheres 22.0
2018 Male, age 76, both hemispheres 21.8
2245 Female, age 91, both hemispheres 21.8
1933 Female, age 85, both hemispheres 21.2
1990 Female, age 91, right hemisphere 20.7
Perirhinal gyrus
nTPM: 21.9
1841 Female, age 85, right hemisphere 23.2
1794 Male, age 80, right hemisphere 22.5
2521 Female, age 94, right hemisphere 21.6
2848 Male, age 76, right hemisphere 21.2
1847 Female, age 91, left hemisphere 20.9
Subiculum
nTPM: 22.1
1977 Female, age 85, both hemispheres 23.1
2042 Male, age 76, both hemispheres 23.1
1901 Male, age 80, both hemispheres 22.6
2619 Male, age 74, both hemispheres 22.5
2729 Female, age 91, right hemisphere 21.1
2438 Female, age 94, left hemisphere 20.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.5
Samples: 197

Max nTPM: 53.3
Min nTPM: 3.0
Std nTPM: 7.4
Median nTPM: 21.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 53.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 42.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 42.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 42.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 42.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 41.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 38.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 37.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 37.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 37.5
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 37.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.0
FF:10169-103B7 60 years, female 24.0
FF:10153-102I9 76 years, female 16.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.