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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:165.0 nTPM
HPA:165.0 nTPM
GTEx:189.1 nTPM
FANTOM5:48.2 Scaled Tags Per Million
Pig:67.1 nTPM
Mouse:162.7 nTPM
Allen mouse:11.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000531
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 165.0
Sample id Sample description nTPM
Hippocampus
nTPM: 147.3
2621 Female, age 67, right hemisphere 165.0
2148 Female, age 91, left hemisphere 157.5
1898 Male, age 80, left hemisphere 156.6
1855 Male, age 76, left hemisphere 137.9
2529 Female, age 94, left hemisphere 134.3
1911 Female, age 85, right hemisphere 132.5
Dentate gyrus
nTPM: 147.2
1927 Female, age 91, both hemispheres 166.5
2531 Female, age 67, both hemispheres 162.1
2530 Female, age 94, left hemisphere 151.7
2528 Male, age 74, both hemispheres 138.2
2010 Male, age 76, both hemispheres 133.8
2246 Female, age 85, both hemispheres 130.6
Entorhinal gyrus
nTPM: 154.1
2613 Female, age 94, left hemisphere 188.4
2764 Male, age 80, right hemisphere 158.1
1938 Female, age 85, left hemisphere 155.7
2686 Male, age 75, right hemisphere 153.0
1787 Male, age 76, left hemisphere 149.0
2117 Female, age 91, right hemisphere 120.5
Hippocampus, CA1
nTPM: 151.3
2749 Male, age 80, left hemisphere 192.8
2527 Male, age 74, both hemispheres 156.3
1873 Female, age 85, both hemispheres 141.9
2082 Female, age 91, right hemisphere 133.0
2045 Male, age 76, both hemispheres 132.8
Hippocampus, CA2
nTPM: 147.1
1963 Male, age 80, left hemisphere 174.4
1892 Male, age 76, both hemispheres 153.2
2437 Female, age 94, left hemisphere 143.9
2249 Male, age 74, both hemispheres 138.5
2113 Female, age 91, right hemisphere 138.4
1940 Female, age 85, left hemisphere 134.1
Hippocampus, CA3
nTPM: 152.2
2137 Male, age 80, left hemisphere 185.4
2861 Female, age 67, both hemispheres 183.0
2620 Female, age 94, left hemisphere 154.2
1867 Male, age 76, both hemispheres 133.1
2436 Male, age 74, both hemispheres 132.9
1891 Female, age 85, both hemispheres 124.7
Parahippocampal cortex
nTPM: 150.9
2245 Female, age 91, both hemispheres 165.5
2622 Female, age 67, right hemisphere 162.1
1850 Male, age 80, both hemispheres 157.4
2693 Female, age 94, both hemispheres 152.3
2692 Male, age 74, both hemispheres 152.1
2250 Female, age 67, right hemisphere 151.9
1990 Female, age 91, right hemisphere 151.3
1933 Female, age 85, both hemispheres 151.0
2532 Female, age 72, left hemisphere 139.2
2018 Male, age 76, both hemispheres 126.3
Perirhinal gyrus
nTPM: 165.0
1847 Female, age 91, left hemisphere 189.6
2521 Female, age 94, right hemisphere 166.7
1794 Male, age 80, right hemisphere 165.3
1841 Female, age 85, right hemisphere 159.7
2848 Male, age 76, right hemisphere 143.6
Subiculum
nTPM: 130.5
2619 Male, age 74, both hemispheres 148.2
1977 Female, age 85, both hemispheres 144.4
1901 Male, age 80, both hemispheres 135.6
2729 Female, age 91, right hemisphere 128.6
2438 Female, age 94, left hemisphere 114.3
2042 Male, age 76, both hemispheres 111.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 189.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 189.1
Samples: 197

Max nTPM: 535.2
Min nTPM: 14.0
Std nTPM: 94.4
Median nTPM: 187.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 535.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 499.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 440.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 413.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 390.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 364.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 355.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 353.6
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 347.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 342.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 336.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 48.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 48.2
FF:10169-103B7 60 years, female 55.4
FF:10153-102I9 76 years, female 41.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 67.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 67.1
Samples: 4

Max nTPM: 95.2
Min nTPM: 46.8
Sample A Female 95.2
Sample B Female 76.1
Sample C Male 50.1
Sample D Male 46.8
Entorhinal cortex
nTPM: 43.3
Samples: 4

Max nTPM: 50.4
Min nTPM: 37.2
Sample A Female 50.4
Sample B Female 39.2
Sample C Male 46.5
Sample D Male 37.2
Subiculum
nTPM: 40.7
Samples: 4

Max nTPM: 62.0
Min nTPM: 31.7
Sample A Female 62.0
Sample B Female 31.7
Sample C Male 36.9
Sample D Male 32.1
Ventral hippocampus
nTPM: 58.6
Samples: 4

Max nTPM: 96.4
Min nTPM: 30.2
Sample A Female 55.9
Sample B Female 30.2
Sample C Male 51.8
Sample D Male 96.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 162.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 162.7
Samples: 4

Max nTPM: 175.6
Min nTPM: 151.5
Sample A Male 151.5
Sample B Male 164.0
Sample C Female 159.7
Sample D Female 175.6
Hippocampal formation
nTPM: 141.8
Samples: 4

Max nTPM: 153.3
Min nTPM: 133.4
Sample A Male 153.3
Sample B Male 136.4
Sample C Female 144.0
Sample D Female 133.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.3
69782963 Antisense, RP_050505_04_B02, Mouse strain C57BL/6J (56 days, male) 11.3

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