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TRNP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:23.3 nTPM
HPA:23.3 nTPM
GTEx:23.5 nTPM
FANTOM5:16.4 Scaled Tags Per Million
Pig:31.3 nTPM
Mouse:98.5 nTPM
Allen mouse:7.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.3
Sample id Sample description nTPM
Hippocampus
nTPM: 13.2
1898 Male, age 80, left hemisphere 17.4
2621 Female, age 67, right hemisphere 16.3
2529 Female, age 94, left hemisphere 13.0
1911 Female, age 85, right hemisphere 11.6
1855 Male, age 76, left hemisphere 10.9
2148 Female, age 91, left hemisphere 10.1
Dentate gyrus
nTPM: 12.2
1927 Female, age 91, both hemispheres 14.0
2531 Female, age 67, both hemispheres 13.4
2530 Female, age 94, left hemisphere 12.6
2010 Male, age 76, both hemispheres 12.1
2246 Female, age 85, both hemispheres 10.7
2528 Male, age 74, both hemispheres 10.5
Entorhinal gyrus
nTPM: 20.8
2613 Female, age 94, left hemisphere 29.9
2764 Male, age 80, right hemisphere 22.6
2686 Male, age 75, right hemisphere 19.9
1787 Male, age 76, left hemisphere 19.7
1938 Female, age 85, left hemisphere 17.4
2117 Female, age 91, right hemisphere 15.5
Hippocampus, CA1
nTPM: 14.9
2749 Male, age 80, left hemisphere 23.9
2527 Male, age 74, both hemispheres 17.2
2045 Male, age 76, both hemispheres 12.1
2082 Female, age 91, right hemisphere 10.9
1873 Female, age 85, both hemispheres 10.5
Hippocampus, CA2
nTPM: 14.8
2437 Female, age 94, left hemisphere 20.4
1892 Male, age 76, both hemispheres 17.8
2249 Male, age 74, both hemispheres 14.2
1963 Male, age 80, left hemisphere 12.8
1940 Female, age 85, left hemisphere 12.1
2113 Female, age 91, right hemisphere 11.5
Hippocampus, CA3
nTPM: 14.5
1867 Male, age 76, both hemispheres 19.5
2861 Female, age 67, both hemispheres 15.6
2137 Male, age 80, left hemisphere 14.7
2620 Female, age 94, left hemisphere 13.4
1891 Female, age 85, both hemispheres 13.1
2436 Male, age 74, both hemispheres 10.8
Parahippocampal cortex
nTPM: 19.7
1990 Female, age 91, right hemisphere 26.5
2622 Female, age 67, right hemisphere 23.6
2250 Female, age 67, right hemisphere 22.7
2245 Female, age 91, both hemispheres 22.3
2693 Female, age 94, both hemispheres 19.2
1933 Female, age 85, both hemispheres 19.1
1850 Male, age 80, both hemispheres 17.9
2018 Male, age 76, both hemispheres 15.9
2532 Female, age 72, left hemisphere 15.6
2692 Male, age 74, both hemispheres 14.3
Perirhinal gyrus
nTPM: 23.3
1847 Female, age 91, left hemisphere 33.2
2521 Female, age 94, right hemisphere 26.2
1794 Male, age 80, right hemisphere 22.5
2848 Male, age 76, right hemisphere 18.2
1841 Female, age 85, right hemisphere 16.6
Subiculum
nTPM: 17.1
2619 Male, age 74, both hemispheres 22.1
2438 Female, age 94, left hemisphere 21.4
1977 Female, age 85, both hemispheres 21.1
1901 Male, age 80, both hemispheres 16.8
2042 Male, age 76, both hemispheres 10.8
2729 Female, age 91, right hemisphere 10.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.5
Samples: 197

Max nTPM: 73.5
Min nTPM: 1.7
Std nTPM: 14.8
Median nTPM: 20.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 73.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 65.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 64.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 63.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 62.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 61.2
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 60.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 54.9
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 52.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 52.0
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 51.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.4
FF:10169-103B7 60 years, female 18.8
FF:10153-102I9 76 years, female 14.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.3
Samples: 4

Max nTPM: 43.8
Min nTPM: 23.8
Sample A Female 43.8
Sample B Female 33.5
Sample C Male 23.8
Sample D Male 24.2
Entorhinal cortex
nTPM: 22.8
Samples: 4

Max nTPM: 25.1
Min nTPM: 20.2
Sample A Female 21.0
Sample B Female 25.1
Sample C Male 24.8
Sample D Male 20.2
Subiculum
nTPM: 22.7
Samples: 4

Max nTPM: 28.2
Min nTPM: 20.2
Sample A Female 28.2
Sample B Female 21.2
Sample C Male 21.1
Sample D Male 20.2
Ventral hippocampus
nTPM: 27.7
Samples: 4

Max nTPM: 35.4
Min nTPM: 17.6
Sample A Female 29.0
Sample B Female 17.6
Sample C Male 28.7
Sample D Male 35.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 98.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 85.8
Samples: 4

Max nTPM: 93.2
Min nTPM: 79.4
Sample A Male 79.8
Sample B Male 79.4
Sample C Female 93.2
Sample D Female 90.6
Hippocampal formation
nTPM: 98.5
Samples: 4

Max nTPM: 105.2
Min nTPM: 93.1
Sample A Male 101.9
Sample B Male 93.7
Sample C Female 105.2
Sample D Female 93.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.9
75750496 Antisense, RP_060518_04_H07, Mouse strain C57BL/6J (56 days, male) 9.4
72080175 Antisense, RP_051017_03_D01, Mouse strain C57BL/6J (56 days, male) 6.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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