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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:40.8 nTPM
HPA:40.8 nTPM
GTEx:32.5 nTPM
FANTOM5:106.5 Scaled Tags Per Million
Mouse:18.3 nTPM
Allen mouse:0.7 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 40.8
Sample id Sample description nTPM
Amygdala
nTPM: 40.8
2695 Female, age 67, right hemisphere 56.5
2514 Male, age 75, right hemisphere 43.8
2814 Male, age 76, right hemisphere 37.5
1987 Female, age 91, left hemisphere 33.8
2517 Female, age 94, left hemisphere 32.4
Basal amygdala
nTPM: 37.5
2609 Male, age 75, right hemisphere 64.0
2243 Female, age 91, right hemisphere 40.6
2110 Male, age 80, left hemisphere 38.3
1955 Male, age 76, both hemispheres 31.5
2827 Female, age 67, right hemisphere 26.1
2685 Female, age 94, left hemisphere 24.4
Central amygdala
nTPM: 33.5
1905 Male, age 76, both hemispheres 44.8
2515 Male, age 75, right hemisphere 38.3
2239 Male, age 80, left hemisphere 32.8
2826 Female, age 94, left hemisphere 29.7
2701 Female, age 91, right hemisphere 21.9
Corticomedial amygdala
nTPM: 33.0
2428 Male, age 75, right hemisphere 46.6
2829 Male, age 80, left hemisphere 39.8
2242 Female, age 91, right hemisphere 33.0
2535 Female, age 67, right hemisphere 27.5
2429 Female, age 94, left hemisphere 26.5
2240 Male, age 76, both hemispheres 24.6
Lateral amygdala
nTPM: 34.4
2516 Male, age 75, right hemisphere 49.6
1883 Male, age 76, both hemispheres 40.1
2256 Male, age 80, left hemisphere 31.6
2534 Female, age 94, left hemisphere 30.5
2830 Female, age 67, right hemisphere 30.2
2255 Female, age 91, right hemisphere 24.5
Stria terminalis, bed nucleus
nTPM: 20.9
2201 Male, age 74, unknown 29.4
1974 Female, age 91, both hemispheres 17.4
2486 Female, age 94, both hemispheres 15.9

AMYGDALA - GTEx RNA-seqi
Average nTPM 32.5
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 32.5
Samples: 152

Max nTPM: 90.7
Min nTPM: 0.4
Std nTPM: 17.8
Median nTPM: 30.8
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 90.7
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 79.7
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 79.7
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 77.0
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 73.8
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 71.2
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 68.4
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 66.9
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 64.4
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 64.3
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 63.4
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 106.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 106.5
FF:10151-102I7 76 years, female 106.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 18.3
Mouse sample Sample description nTPM
Amygdala
nTPM: 18.3
Samples: 4

Max nTPM: 20.1
Min nTPM: 16.0
Sample A Male 19.1
Sample B Male 16.0
Sample C Female 20.1
Sample D Female 17.9

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.7
71380471 Antisense, RP_050412_01_G04, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.