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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:32.5 nTPM
HPA:32.5 nTPM
GTEx:20.9 nTPM
FANTOM5:106.3 Scaled Tags Per Million
Mouse:15.0 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.5
Sample id Sample description nTPM
Hippocampus
nTPM: 32.5
2148 Female, age 91, left hemisphere 40.4
1855 Male, age 76, left hemisphere 36.1
2529 Female, age 94, left hemisphere 35.0
1898 Male, age 80, left hemisphere 30.4
1911 Female, age 85, right hemisphere 30.0
2621 Female, age 67, right hemisphere 22.8
Dentate gyrus
nTPM: 29.4
2528 Male, age 74, both hemispheres 39.4
2530 Female, age 94, left hemisphere 39.1
2246 Female, age 85, both hemispheres 33.0
2010 Male, age 76, both hemispheres 24.2
1927 Female, age 91, both hemispheres 20.6
2531 Female, age 67, both hemispheres 20.1
Entorhinal gyrus
nTPM: 23.6
2117 Female, age 91, right hemisphere 37.6
1938 Female, age 85, left hemisphere 25.9
2613 Female, age 94, left hemisphere 20.9
2764 Male, age 80, right hemisphere 20.3
2686 Male, age 75, right hemisphere 19.0
1787 Male, age 76, left hemisphere 18.2
Hippocampus, CA1
nTPM: 27.5
2527 Male, age 74, both hemispheres 36.7
2082 Female, age 91, right hemisphere 33.4
1873 Female, age 85, both hemispheres 31.1
2045 Male, age 76, both hemispheres 21.2
2749 Male, age 80, left hemisphere 14.9
Hippocampus, CA2
nTPM: 26.5
2249 Male, age 74, both hemispheres 34.1
2113 Female, age 91, right hemisphere 31.9
1940 Female, age 85, left hemisphere 29.8
2437 Female, age 94, left hemisphere 25.7
1963 Male, age 80, left hemisphere 21.5
1892 Male, age 76, both hemispheres 16.0
Hippocampus, CA3
nTPM: 24.0
2861 Female, age 67, both hemispheres 35.1
2620 Female, age 94, left hemisphere 27.6
1891 Female, age 85, both hemispheres 26.9
2436 Male, age 74, both hemispheres 22.8
1867 Male, age 76, both hemispheres 16.6
2137 Male, age 80, left hemisphere 14.9
Parahippocampal cortex
nTPM: 23.3
2692 Male, age 74, both hemispheres 34.5
1933 Female, age 85, both hemispheres 28.4
2622 Female, age 67, right hemisphere 27.0
2245 Female, age 91, both hemispheres 24.4
2250 Female, age 67, right hemisphere 22.7
2018 Male, age 76, both hemispheres 20.6
2532 Female, age 72, left hemisphere 20.3
1990 Female, age 91, right hemisphere 19.8
1850 Male, age 80, both hemispheres 17.9
2693 Female, age 94, both hemispheres 17.0
Perirhinal gyrus
nTPM: 17.9
1847 Female, age 91, left hemisphere 20.2
1794 Male, age 80, right hemisphere 19.4
2521 Female, age 94, right hemisphere 18.0
1841 Female, age 85, right hemisphere 17.9
2848 Male, age 76, right hemisphere 14.0
Subiculum
nTPM: 27.6
2729 Female, age 91, right hemisphere 43.8
2619 Male, age 74, both hemispheres 30.2
1977 Female, age 85, both hemispheres 25.9
2042 Male, age 76, both hemispheres 24.6
2438 Female, age 94, left hemisphere 20.7
1901 Male, age 80, both hemispheres 20.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.9
Samples: 197

Max nTPM: 57.4
Min nTPM: 2.4
Std nTPM: 10.6
Median nTPM: 18.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 57.4
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 54.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 52.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 47.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 46.9
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 46.4
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 45.8
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 45.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 45.2
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 44.8
GTEX-1I1GQ-0011-R1a-SM-CY8GG 50-59 years, male 40.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 106.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 106.3
FF:10153-102I9 76 years, female 139.3
FF:10169-103B7 60 years, female 73.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.0
Samples: 4

Max nTPM: 17.8
Min nTPM: 13.1
Sample A Male 17.8
Sample B Male 14.2
Sample C Female 13.1
Sample D Female 14.8
Hippocampal formation
nTPM: 13.4
Samples: 4

Max nTPM: 14.5
Min nTPM: 11.6
Sample A Male 13.5
Sample B Male 14.5
Sample C Female 11.6
Sample D Female 13.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
71380471 Antisense, RP_050412_01_G04, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.