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LSM14A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:25.5 nTPM
HPA:25.5 nTPM
GTEx:37.1 nTPM
FANTOM5:100.5 Scaled Tags Per Million
Pig:37.2 nTPM
Mouse:47.0 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017961
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.5
Sample id Sample description nTPM
Hippocampus
nTPM: 25.5
1855 Male, age 76, left hemisphere 27.6
1898 Male, age 80, left hemisphere 27.0
2148 Female, age 91, left hemisphere 25.3
2529 Female, age 94, left hemisphere 25.1
1911 Female, age 85, right hemisphere 24.5
2621 Female, age 67, right hemisphere 23.5
Dentate gyrus
nTPM: 25.5
2528 Male, age 74, both hemispheres 27.7
2010 Male, age 76, both hemispheres 26.7
1927 Female, age 91, both hemispheres 25.5
2530 Female, age 94, left hemisphere 24.8
2246 Female, age 85, both hemispheres 24.1
2531 Female, age 67, both hemispheres 24.0
Entorhinal gyrus
nTPM: 24.7
1938 Female, age 85, left hemisphere 26.5
2613 Female, age 94, left hemisphere 25.6
1787 Male, age 76, left hemisphere 24.6
2117 Female, age 91, right hemisphere 24.4
2764 Male, age 80, right hemisphere 24.0
2686 Male, age 75, right hemisphere 23.0
Hippocampus, CA1
nTPM: 25.3
1873 Female, age 85, both hemispheres 27.5
2749 Male, age 80, left hemisphere 27.1
2082 Female, age 91, right hemisphere 24.6
2527 Male, age 74, both hemispheres 23.6
2045 Male, age 76, both hemispheres 23.4
Hippocampus, CA2
nTPM: 25.0
2249 Male, age 74, both hemispheres 26.5
1940 Female, age 85, left hemisphere 25.1
1963 Male, age 80, left hemisphere 25.1
1892 Male, age 76, both hemispheres 24.6
2437 Female, age 94, left hemisphere 24.6
2113 Female, age 91, right hemisphere 24.2
Hippocampus, CA3
nTPM: 25.5
2436 Male, age 74, both hemispheres 27.0
2137 Male, age 80, left hemisphere 26.1
1891 Female, age 85, both hemispheres 25.9
1867 Male, age 76, both hemispheres 25.6
2620 Female, age 94, left hemisphere 24.2
2861 Female, age 67, both hemispheres 24.0
Parahippocampal cortex
nTPM: 25.1
1990 Female, age 91, right hemisphere 27.0
2692 Male, age 74, both hemispheres 26.4
2250 Female, age 67, right hemisphere 25.6
2018 Male, age 76, both hemispheres 25.5
2693 Female, age 94, both hemispheres 25.3
2532 Female, age 72, left hemisphere 25.2
2622 Female, age 67, right hemisphere 24.9
1933 Female, age 85, both hemispheres 24.0
1850 Male, age 80, both hemispheres 23.8
2245 Female, age 91, both hemispheres 23.1
Perirhinal gyrus
nTPM: 25.3
1794 Male, age 80, right hemisphere 26.1
1841 Female, age 85, right hemisphere 26.1
1847 Female, age 91, left hemisphere 25.5
2848 Male, age 76, right hemisphere 24.5
2521 Female, age 94, right hemisphere 24.3
Subiculum
nTPM: 25.3
2438 Female, age 94, left hemisphere 28.0
1901 Male, age 80, both hemispheres 26.0
2729 Female, age 91, right hemisphere 25.0
2619 Male, age 74, both hemispheres 24.7
2042 Male, age 76, both hemispheres 24.4
1977 Female, age 85, both hemispheres 23.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.1
Samples: 197

Max nTPM: 61.4
Min nTPM: 23.6
Std nTPM: 7.5
Median nTPM: 35.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 61.4
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 60.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 59.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 58.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 58.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 57.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 53.5
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 53.5
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 53.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 52.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 51.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.5
FF:10153-102I9 76 years, female 103.7
FF:10169-103B7 60 years, female 97.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 37.2
Samples: 4

Max nTPM: 44.8
Min nTPM: 28.3
Sample A Female 44.8
Sample B Female 34.2
Sample C Male 41.6
Sample D Male 28.3
Entorhinal cortex
nTPM: 29.3
Samples: 4

Max nTPM: 32.6
Min nTPM: 26.3
Sample A Female 29.9
Sample B Female 32.6
Sample C Male 28.3
Sample D Male 26.3
Subiculum
nTPM: 30.8
Samples: 4

Max nTPM: 36.7
Min nTPM: 26.7
Sample A Female 36.7
Sample B Female 29.4
Sample C Male 26.7
Sample D Male 30.5
Ventral hippocampus
nTPM: 30.6
Samples: 4

Max nTPM: 34.2
Min nTPM: 27.3
Sample A Female 31.6
Sample B Female 27.3
Sample C Male 29.4
Sample D Male 34.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 47.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.1
Samples: 4

Max nTPM: 46.8
Min nTPM: 40.9
Sample A Male 42.5
Sample B Male 46.8
Sample C Female 42.0
Sample D Female 40.9
Hippocampal formation
nTPM: 47.0
Samples: 4

Max nTPM: 48.9
Min nTPM: 45.1
Sample A Male 45.1
Sample B Male 45.2
Sample C Female 48.9
Sample D Female 48.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
68546374 Antisense, RP_050120_02_D05, Mouse strain C57BL/6J (56 days, male) 3.8

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