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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:88.6 nTPM
HPA:88.6 nTPM
GTEx:127.0 nTPM
FANTOM5:63.8 Scaled Tags Per Million
Pig:223.5 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043640Antibody HPA046280
Glial cells Not detectedNot detected
Neuronal cells LowMedium




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 88.6
Sample id Sample description nTPM
Hippocampus
nTPM: 53.6
1898 Male, age 80, left hemisphere 84.8
2621 Female, age 67, right hemisphere 57.5
2148 Female, age 91, left hemisphere 50.4
2529 Female, age 94, left hemisphere 48.7
1855 Male, age 76, left hemisphere 43.7
1911 Female, age 85, right hemisphere 36.6
Dentate gyrus
nTPM: 68.1
2530 Female, age 94, left hemisphere 94.7
1927 Female, age 91, both hemispheres 86.5
2528 Male, age 74, both hemispheres 69.3
2246 Female, age 85, both hemispheres 59.4
2010 Male, age 76, both hemispheres 49.7
2531 Female, age 67, both hemispheres 49.2
Entorhinal gyrus
nTPM: 76.4
2764 Male, age 80, right hemisphere 103.4
2613 Female, age 94, left hemisphere 101.8
1787 Male, age 76, left hemisphere 82.4
1938 Female, age 85, left hemisphere 79.0
2686 Male, age 75, right hemisphere 47.7
2117 Female, age 91, right hemisphere 44.2
Hippocampus, CA1
nTPM: 62.9
2749 Male, age 80, left hemisphere 107.3
2527 Male, age 74, both hemispheres 73.4
1873 Female, age 85, both hemispheres 50.2
2045 Male, age 76, both hemispheres 41.9
2082 Female, age 91, right hemisphere 41.4
Hippocampus, CA2
nTPM: 57.4
2437 Female, age 94, left hemisphere 100.2
1963 Male, age 80, left hemisphere 64.7
2249 Male, age 74, both hemispheres 61.9
1892 Male, age 76, both hemispheres 55.2
2113 Female, age 91, right hemisphere 32.7
1940 Female, age 85, left hemisphere 29.5
Hippocampus, CA3
nTPM: 57.0
2137 Male, age 80, left hemisphere 82.1
2436 Male, age 74, both hemispheres 62.0
2620 Female, age 94, left hemisphere 52.4
1867 Male, age 76, both hemispheres 50.4
1891 Female, age 85, both hemispheres 49.3
2861 Female, age 67, both hemispheres 46.0
Parahippocampal cortex
nTPM: 72.5
2250 Female, age 67, right hemisphere 114.6
1990 Female, age 91, right hemisphere 104.0
2245 Female, age 91, both hemispheres 88.9
1933 Female, age 85, both hemispheres 80.8
1850 Male, age 80, both hemispheres 69.7
2693 Female, age 94, both hemispheres 64.7
2532 Female, age 72, left hemisphere 57.4
2622 Female, age 67, right hemisphere 56.3
2692 Male, age 74, both hemispheres 47.1
2018 Male, age 76, both hemispheres 41.9
Perirhinal gyrus
nTPM: 88.6
1847 Female, age 91, left hemisphere 136.6
2521 Female, age 94, right hemisphere 108.9
1794 Male, age 80, right hemisphere 81.5
1841 Female, age 85, right hemisphere 65.9
2848 Male, age 76, right hemisphere 50.1
Subiculum
nTPM: 68.1
1977 Female, age 85, both hemispheres 99.2
2438 Female, age 94, left hemisphere 98.3
2619 Male, age 74, both hemispheres 77.0
1901 Male, age 80, both hemispheres 68.0
2042 Male, age 76, both hemispheres 34.5
2729 Female, age 91, right hemisphere 31.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 127.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 127.0
Samples: 197

Max nTPM: 383.7
Min nTPM: 14.0
Std nTPM: 76.3
Median nTPM: 114.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 383.7
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 332.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 321.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 309.7
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 304.6
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 297.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 288.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 286.1
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 269.4
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 266.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 260.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.8
FF:10169-103B7 60 years, female 71.1
FF:10153-102I9 76 years, female 56.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 223.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 220.3
Samples: 4

Max nTPM: 320.8
Min nTPM: 145.2
Sample A Female 320.8
Sample B Female 242.7
Sample C Male 145.2
Sample D Male 172.5
Entorhinal cortex
nTPM: 195.0
Samples: 4

Max nTPM: 226.2
Min nTPM: 162.4
Sample A Female 209.6
Sample B Female 181.9
Sample C Male 226.2
Sample D Male 162.4
Subiculum
nTPM: 223.6
Samples: 4

Max nTPM: 313.5
Min nTPM: 176.4
Sample A Female 313.5
Sample B Female 200.4
Sample C Male 176.4
Sample D Male 203.9
Ventral hippocampus
nTPM: 195.2
Samples: 4

Max nTPM: 238.4
Min nTPM: 128.5
Sample A Female 235.5
Sample B Female 128.5
Sample C Male 238.4
Sample D Male 178.3

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.