ABOUTMENU
HELP
NEWS
NISCH
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:56.3 nTPM
HPA:56.3 nTPM
GTEx:54.3 nTPM
FANTOM5:89.2 Scaled Tags Per Million
Pig:59.2 nTPM
Mouse:151.5 nTPM
Allen mouse:8.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023189
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 56.3
Sample id Sample description nTPM
Hippocampus
nTPM: 41.7
2148 Female, age 91, left hemisphere 62.0
2621 Female, age 67, right hemisphere 56.6
2529 Female, age 94, left hemisphere 35.7
1898 Male, age 80, left hemisphere 33.7
1855 Male, age 76, left hemisphere 31.5
1911 Female, age 85, right hemisphere 31.0
Dentate gyrus
nTPM: 47.8
2531 Female, age 67, both hemispheres 89.9
1927 Female, age 91, both hemispheres 52.4
2528 Male, age 74, both hemispheres 43.0
2246 Female, age 85, both hemispheres 39.8
2530 Female, age 94, left hemisphere 32.8
2010 Male, age 76, both hemispheres 29.2
Entorhinal gyrus
nTPM: 53.4
2613 Female, age 94, left hemisphere 74.1
2764 Male, age 80, right hemisphere 58.6
1938 Female, age 85, left hemisphere 56.1
1787 Male, age 76, left hemisphere 52.2
2686 Male, age 75, right hemisphere 44.4
2117 Female, age 91, right hemisphere 35.3
Hippocampus, CA1
nTPM: 44.6
2045 Male, age 76, both hemispheres 52.8
2749 Male, age 80, left hemisphere 50.0
2527 Male, age 74, both hemispheres 43.1
1873 Female, age 85, both hemispheres 41.5
2082 Female, age 91, right hemisphere 35.3
Hippocampus, CA2
nTPM: 34.2
2437 Female, age 94, left hemisphere 41.9
1892 Male, age 76, both hemispheres 35.2
1963 Male, age 80, left hemisphere 34.0
2113 Female, age 91, right hemisphere 33.0
1940 Female, age 85, left hemisphere 32.7
2249 Male, age 74, both hemispheres 28.3
Hippocampus, CA3
nTPM: 56.3
2620 Female, age 94, left hemisphere 93.2
2861 Female, age 67, both hemispheres 76.1
2137 Male, age 80, left hemisphere 56.1
2436 Male, age 74, both hemispheres 46.4
1867 Male, age 76, both hemispheres 35.0
1891 Female, age 85, both hemispheres 31.2
Parahippocampal cortex
nTPM: 45.2
2622 Female, age 67, right hemisphere 60.2
2693 Female, age 94, both hemispheres 54.1
2245 Female, age 91, both hemispheres 49.6
1990 Female, age 91, right hemisphere 47.8
1933 Female, age 85, both hemispheres 46.2
1850 Male, age 80, both hemispheres 44.6
2532 Female, age 72, left hemisphere 43.7
2250 Female, age 67, right hemisphere 42.8
2692 Male, age 74, both hemispheres 34.1
2018 Male, age 76, both hemispheres 28.7
Perirhinal gyrus
nTPM: 52.0
1847 Female, age 91, left hemisphere 62.9
1794 Male, age 80, right hemisphere 57.2
2521 Female, age 94, right hemisphere 52.7
2848 Male, age 76, right hemisphere 45.9
1841 Female, age 85, right hemisphere 41.6
Subiculum
nTPM: 32.3
1977 Female, age 85, both hemispheres 43.0
2729 Female, age 91, right hemisphere 40.2
2619 Male, age 74, both hemispheres 37.1
2438 Female, age 94, left hemisphere 30.1
1901 Male, age 80, both hemispheres 27.2
2042 Male, age 76, both hemispheres 16.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.3
Samples: 197

Max nTPM: 112.9
Min nTPM: 26.9
Std nTPM: 18.2
Median nTPM: 49.7
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 112.9
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 107.9
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 101.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 98.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 96.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 95.9
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 92.6
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 92.4
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 91.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 89.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 89.4
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.2
FF:10169-103B7 60 years, female 102.5
FF:10153-102I9 76 years, female 75.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 55.0
Samples: 4

Max nTPM: 66.8
Min nTPM: 39.0
Sample A Female 66.8
Sample B Female 62.4
Sample C Male 51.7
Sample D Male 39.0
Entorhinal cortex
nTPM: 55.3
Samples: 4

Max nTPM: 61.8
Min nTPM: 47.3
Sample A Female 60.7
Sample B Female 51.3
Sample C Male 61.8
Sample D Male 47.3
Subiculum
nTPM: 57.0
Samples: 4

Max nTPM: 68.9
Min nTPM: 49.5
Sample A Female 68.9
Sample B Female 52.1
Sample C Male 57.6
Sample D Male 49.5
Ventral hippocampus
nTPM: 59.2
Samples: 4

Max nTPM: 76.5
Min nTPM: 40.7
Sample A Female 57.6
Sample B Female 40.7
Sample C Male 76.5
Sample D Male 61.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 151.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 151.5
Samples: 4

Max nTPM: 175.4
Min nTPM: 138.4
Sample A Male 143.7
Sample B Male 138.4
Sample C Female 148.4
Sample D Female 175.4
Hippocampal formation
nTPM: 149.5
Samples: 4

Max nTPM: 159.3
Min nTPM: 141.4
Sample A Male 141.4
Sample B Male 159.3
Sample C Female 150.2
Sample D Female 147.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.9
69134550 Antisense, RP_050321_03_B02, Mouse strain C57BL/6J (56 days, male) 12.2
73811513 Antisense, RP_051212_03_C12, Mouse strain C57BL/6J (56 days, male) 5.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.