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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:11.1 nTPM
HPA:11.1 nTPM
GTEx:11.8 nTPM
FANTOM5:12.3 Scaled Tags Per Million
Pig:15.7 nTPM
Mouse:18.0 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 11.1
Sample id Sample description nTPM
Hippocampus
nTPM: 9.1
1898 Male, age 80, left hemisphere 9.7
1911 Female, age 85, right hemisphere 9.4
2529 Female, age 94, left hemisphere 9.3
1855 Male, age 76, left hemisphere 8.8
2621 Female, age 67, right hemisphere 8.8
2148 Female, age 91, left hemisphere 8.5
Dentate gyrus
nTPM: 9.3
2246 Female, age 85, both hemispheres 10.1
2531 Female, age 67, both hemispheres 9.8
2528 Male, age 74, both hemispheres 9.6
2010 Male, age 76, both hemispheres 8.9
2530 Female, age 94, left hemisphere 8.8
1927 Female, age 91, both hemispheres 8.7
Entorhinal gyrus
nTPM: 9.6
1938 Female, age 85, left hemisphere 10.6
2764 Male, age 80, right hemisphere 10.6
1787 Male, age 76, left hemisphere 10.1
2117 Female, age 91, right hemisphere 9.4
2613 Female, age 94, left hemisphere 8.6
2686 Male, age 75, right hemisphere 8.4
Hippocampus, CA1
nTPM: 9.1
2045 Male, age 76, both hemispheres 9.9
2527 Male, age 74, both hemispheres 9.5
1873 Female, age 85, both hemispheres 9.2
2082 Female, age 91, right hemisphere 9.1
2749 Male, age 80, left hemisphere 7.8
Hippocampus, CA2
nTPM: 9.1
2249 Male, age 74, both hemispheres 10.4
1940 Female, age 85, left hemisphere 9.6
1892 Male, age 76, both hemispheres 9.3
2437 Female, age 94, left hemisphere 8.6
2113 Female, age 91, right hemisphere 8.4
1963 Male, age 80, left hemisphere 8.1
Hippocampus, CA3
nTPM: 9.0
1891 Female, age 85, both hemispheres 10.4
2436 Male, age 74, both hemispheres 10.2
1867 Male, age 76, both hemispheres 9.3
2620 Female, age 94, left hemisphere 8.4
2861 Female, age 67, both hemispheres 7.9
2137 Male, age 80, left hemisphere 7.7
Parahippocampal cortex
nTPM: 9.8
1850 Male, age 80, both hemispheres 11.4
2250 Female, age 67, right hemisphere 10.8
1933 Female, age 85, both hemispheres 10.7
1990 Female, age 91, right hemisphere 9.7
2532 Female, age 72, left hemisphere 9.7
2018 Male, age 76, both hemispheres 9.6
2693 Female, age 94, both hemispheres 9.4
2245 Female, age 91, both hemispheres 9.3
2692 Male, age 74, both hemispheres 9.2
2622 Female, age 67, right hemisphere 8.4
Perirhinal gyrus
nTPM: 11.1
2848 Male, age 76, right hemisphere 12.6
1841 Female, age 85, right hemisphere 11.5
1794 Male, age 80, right hemisphere 10.7
1847 Female, age 91, left hemisphere 10.4
2521 Female, age 94, right hemisphere 10.1
Subiculum
nTPM: 9.5
1977 Female, age 85, both hemispheres 11.1
1901 Male, age 80, both hemispheres 9.5
2619 Male, age 74, both hemispheres 9.4
2042 Male, age 76, both hemispheres 9.2
2438 Female, age 94, left hemisphere 8.9
2729 Female, age 91, right hemisphere 8.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.8
Samples: 197

Max nTPM: 29.1
Min nTPM: 6.6
Std nTPM: 3.1
Median nTPM: 11.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 29.1
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 23.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 20.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 19.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 19.3
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 19.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 18.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 18.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 17.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 17.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 17.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 12.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 12.3
FF:10153-102I9 76 years, female 15.2
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 12.1
Samples: 4

Max nTPM: 14.8
Min nTPM: 9.1
Sample A Female 14.8
Sample B Female 12.3
Sample C Male 9.1
Sample D Male 12.2
Entorhinal cortex
nTPM: 8.5
Samples: 4

Max nTPM: 10.7
Min nTPM: 5.6
Sample A Female 5.6
Sample B Female 9.2
Sample C Male 10.7
Sample D Male 8.3
Subiculum
nTPM: 15.7
Samples: 4

Max nTPM: 16.4
Min nTPM: 15.0
Sample A Female 15.0
Sample B Female 15.2
Sample C Male 16.0
Sample D Male 16.4
Ventral hippocampus
nTPM: 13.6
Samples: 4

Max nTPM: 16.0
Min nTPM: 10.3
Sample A Female 15.6
Sample B Female 12.6
Sample C Male 16.0
Sample D Male 10.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.8
Samples: 4

Max nTPM: 19.6
Min nTPM: 16.3
Sample A Male 17.2
Sample B Male 16.3
Sample C Female 19.6
Sample D Female 18.0
Hippocampal formation
nTPM: 18.0
Samples: 4

Max nTPM: 19.6
Min nTPM: 16.0
Sample A Male 19.6
Sample B Male 17.9
Sample C Female 16.0
Sample D Female 18.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
73732145 Antisense, RP_050927_02_C05, Mouse strain C57BL/6J (56 days, male) 0.6
71612180 Antisense, RP_050927_02_C05, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

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