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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:43.3 nTPM
HPA:43.3 nTPM
GTEx:55.3 nTPM
FANTOM5:49.7 Scaled Tags Per Million
Pig:29.6 nTPM
Mouse:42.0 nTPM
Allen mouse:4.8 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 43.3
Sample id Sample description nTPM
Amygdala
nTPM: 23.8
2517 Female, age 94, left hemisphere 32.1
2695 Female, age 67, right hemisphere 24.2
2814 Male, age 76, right hemisphere 23.1
1987 Female, age 91, left hemisphere 22.6
2514 Male, age 75, right hemisphere 17.3
Basal amygdala
nTPM: 43.3
2827 Female, age 67, right hemisphere 61.4
2685 Female, age 94, left hemisphere 56.6
2243 Female, age 91, right hemisphere 41.1
2609 Male, age 75, right hemisphere 38.1
2110 Male, age 80, left hemisphere 37.9
1955 Male, age 76, both hemispheres 24.9
Central amygdala
nTPM: 32.8
2826 Female, age 94, left hemisphere 42.7
2239 Male, age 80, left hemisphere 38.6
2701 Female, age 91, right hemisphere 31.0
2515 Male, age 75, right hemisphere 29.3
1905 Male, age 76, both hemispheres 22.5
Corticomedial amygdala
nTPM: 41.7
2535 Female, age 67, right hemisphere 77.3
2829 Male, age 80, left hemisphere 45.5
2242 Female, age 91, right hemisphere 45.4
2429 Female, age 94, left hemisphere 36.8
2428 Male, age 75, right hemisphere 24.0
2240 Male, age 76, both hemispheres 21.4
Lateral amygdala
nTPM: 34.9
2256 Male, age 80, left hemisphere 44.1
2830 Female, age 67, right hemisphere 42.0
2255 Female, age 91, right hemisphere 40.8
2534 Female, age 94, left hemisphere 36.1
2516 Male, age 75, right hemisphere 23.2
1883 Male, age 76, both hemispheres 22.9
Stria terminalis, bed nucleus
nTPM: 27.3
2486 Female, age 94, both hemispheres 29.2
2201 Male, age 74, unknown 28.1
1974 Female, age 91, both hemispheres 24.5

AMYGDALA - GTEx RNA-seqi
Average nTPM 55.3
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 55.3
Samples: 152

Max nTPM: 97.8
Min nTPM: 20.0
Std nTPM: 14.5
Median nTPM: 54.1
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 97.8
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 90.0
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 88.2
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 86.9
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 85.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 85.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 85.2
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 83.1
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 82.6
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 82.2
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 82.2
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 49.7
FF:10151-102I7 76 years, female 49.7

AMYGDALA - Pig RNA-seqi
Average nTPM 29.6
Pig sample Sample description nTPM
Amygdala
nTPM: 29.6
Samples: 4

Max nTPM: 35.5
Min nTPM: 22.8
Sample A Female 35.5
Sample B Female 22.8
Sample C Male 30.5
Sample D Male 29.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 42.0
Mouse sample Sample description nTPM
Amygdala
nTPM: 42.0
Samples: 4

Max nTPM: 45.5
Min nTPM: 39.8
Sample A Male 42.2
Sample B Male 39.8
Sample C Female 45.5
Sample D Female 40.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 4.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.8
71307244 Antisense, RP_050825_01_E05, Mouse strain C57BL/6J (56 days, male) 4.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.