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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:36.3 nTPM
HPA:36.3 nTPM
GTEx:48.5 nTPM
FANTOM5:35.9 Scaled Tags Per Million
Pig:35.7 nTPM
Mouse:32.3 nTPM
Allen mouse:4.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044341Antibody CAB026388
Glial cells MediumMedium
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.3
Sample id Sample description nTPM
Hippocampus
nTPM: 32.5
2621 Female, age 67, right hemisphere 43.5
2529 Female, age 94, left hemisphere 41.3
2148 Female, age 91, left hemisphere 35.4
1855 Male, age 76, left hemisphere 26.1
1898 Male, age 80, left hemisphere 25.1
1911 Female, age 85, right hemisphere 23.6
Dentate gyrus
nTPM: 32.6
2531 Female, age 67, both hemispheres 53.0
2530 Female, age 94, left hemisphere 34.5
2246 Female, age 85, both hemispheres 32.1
2528 Male, age 74, both hemispheres 28.3
1927 Female, age 91, both hemispheres 26.8
2010 Male, age 76, both hemispheres 20.8
Entorhinal gyrus
nTPM: 34.7
2686 Male, age 75, right hemisphere 43.4
2613 Female, age 94, left hemisphere 36.8
2764 Male, age 80, right hemisphere 34.9
2117 Female, age 91, right hemisphere 34.3
1787 Male, age 76, left hemisphere 29.6
1938 Female, age 85, left hemisphere 29.3
Hippocampus, CA1
nTPM: 25.7
2082 Female, age 91, right hemisphere 32.8
2527 Male, age 74, both hemispheres 29.1
1873 Female, age 85, both hemispheres 25.6
2045 Male, age 76, both hemispheres 21.0
2749 Male, age 80, left hemisphere 19.9
Hippocampus, CA2
nTPM: 24.8
2437 Female, age 94, left hemisphere 34.8
1963 Male, age 80, left hemisphere 28.1
2113 Female, age 91, right hemisphere 27.7
1940 Female, age 85, left hemisphere 23.3
1892 Male, age 76, both hemispheres 19.0
2249 Male, age 74, both hemispheres 16.1
Hippocampus, CA3
nTPM: 36.3
2861 Female, age 67, both hemispheres 65.6
2620 Female, age 94, left hemisphere 60.0
2137 Male, age 80, left hemisphere 25.7
1891 Female, age 85, both hemispheres 25.5
1867 Male, age 76, both hemispheres 21.3
2436 Male, age 74, both hemispheres 19.6
Parahippocampal cortex
nTPM: 30.6
2622 Female, age 67, right hemisphere 45.5
2245 Female, age 91, both hemispheres 37.0
2693 Female, age 94, both hemispheres 34.2
2692 Male, age 74, both hemispheres 33.4
2532 Female, age 72, left hemisphere 30.6
2250 Female, age 67, right hemisphere 28.4
1933 Female, age 85, both hemispheres 28.2
1990 Female, age 91, right hemisphere 24.1
1850 Male, age 80, both hemispheres 22.6
2018 Male, age 76, both hemispheres 22.1
Perirhinal gyrus
nTPM: 28.2
2521 Female, age 94, right hemisphere 33.6
2848 Male, age 76, right hemisphere 29.9
1794 Male, age 80, right hemisphere 28.8
1841 Female, age 85, right hemisphere 25.2
1847 Female, age 91, left hemisphere 23.7
Subiculum
nTPM: 28.5
2619 Male, age 74, both hemispheres 34.2
2438 Female, age 94, left hemisphere 30.2
2042 Male, age 76, both hemispheres 28.1
1977 Female, age 85, both hemispheres 27.7
2729 Female, age 91, right hemisphere 27.7
1901 Male, age 80, both hemispheres 23.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.5
Samples: 197

Max nTPM: 85.8
Min nTPM: 22.8
Std nTPM: 12.2
Median nTPM: 47.7
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 85.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 84.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 83.1
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 79.4
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 77.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 75.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 72.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 71.9
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 71.0
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 70.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 70.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.9
FF:10153-102I9 76 years, female 44.6
FF:10169-103B7 60 years, female 27.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 25.6
Samples: 4

Max nTPM: 28.7
Min nTPM: 22.7
Sample A Female 28.7
Sample B Female 26.3
Sample C Male 24.6
Sample D Male 22.7
Entorhinal cortex
nTPM: 35.8
Samples: 4

Max nTPM: 41.1
Min nTPM: 28.4
Sample A Female 41.1
Sample B Female 28.4
Sample C Male 40.7
Sample D Male 32.8
Subiculum
nTPM: 28.1
Samples: 4

Max nTPM: 36.9
Min nTPM: 23.0
Sample A Female 36.9
Sample B Female 23.3
Sample C Male 29.0
Sample D Male 23.0
Ventral hippocampus
nTPM: 27.1
Samples: 4

Max nTPM: 37.9
Min nTPM: 20.7
Sample A Female 20.7
Sample B Female 20.7
Sample C Male 37.9
Sample D Male 28.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.3
Samples: 4

Max nTPM: 34.8
Min nTPM: 27.6
Sample A Male 34.3
Sample B Male 32.3
Sample C Female 27.6
Sample D Female 34.8
Hippocampal formation
nTPM: 24.1
Samples: 4

Max nTPM: 26.7
Min nTPM: 21.7
Sample A Male 21.7
Sample B Male 24.4
Sample C Female 23.7
Sample D Female 26.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.7
71307244 Antisense, RP_050825_01_E05, Mouse strain C57BL/6J (56 days, male) 4.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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