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PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:100.3 nTPM
HPA:100.3 nTPM
FANTOM5:62.8 Scaled Tags Per Million
Pig:11.0 nTPM
Mouse:8.1 nTPM
Allen mouse:0.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 100.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 77.7
2301 Female, age 85, both hemispheres 102.8
2188 Female, age 91, both hemispheres 92.3
2090 Male, age 80, both hemispheres 72.0
1984 Male, age 76, both hemispheres 43.9
Area postrema
nTPM: 31.7
2306 Male, age 80, both hemispheres 46.9
2799 Male, age 61, both hemispheres 25.0
2054 Male, age 76, both hemispheres 23.4
Cuneate nuclei
nTPM: 61.9
2381 Male, age 80, both hemispheres 69.9
2376 Male, age 61, both hemispheres 61.3
2131 Male, age 76, both hemispheres 54.7
Dorsal cochlear nucleus
nTPM: 49.9
2187 Female, age 91, both hemispheres 82.1
2378 Male, age 80, both hemispheres 46.2
2802 Male, age 74, right hemisphere 46.1
2058 Male, age 76, both hemispheres 40.4
2370 Male, age 61, both hemispheres 34.5
Dorsal medullary reticular nucleus
nTPM: 59.4
2040 Female, age 85, both hemispheres 63.6
2088 Male, age 76, both hemispheres 61.7
2373 Male, age 61, both hemispheres 53.0
Dorsal motor vagal complex
nTPM: 33.5
2185 Male, age 76, both hemispheres 51.8
2000 Male, age 74, unknown 42.0
2807 Female, age 85, both hemispheres 31.1
2133 Female, age 91, both hemispheres 30.3
2844 Male, age 55, unknown 29.2
2643 Male, age 74, both hemispheres 28.4
2797 Male, age 61, both hemispheres 27.6
2813 Female, age 72, unknown 27.1
Dorsal tegmental nucleus
nTPM: 52.5
2083 Male, age 80, both hemispheres 72.3
2326 Male, age 74, both hemispheres 52.2
1936 Male, age 76, left hemisphere 50.8
2358 Male, age 61, both hemispheres 34.8
Dorsolateral tegmental area
nTPM: 55.2
2751 Female, age 85, both hemispheres 88.3
2654 Male, age 80, both hemispheres 74.1
2337 Male, age 61, both hemispheres 55.1
2360 Male, age 74, both hemispheres 30.9
2141 Male, age 76, both hemispheres 27.5
Gigantocellular reticular nuclei, medullary
nTPM: 63.6
2314 Male, age 61, both hemispheres 100.5
1876 Female, age 85, both hemispheres 76.0
2387 Female, age 91, both hemispheres 70.8
2310 Male, age 80, both hemispheres 60.6
2022 Male, age 76, right hemisphere 39.0
2462 Male, age 74, both hemispheres 34.7
Gigantocellular reticular nuclei, pars
nTPM: 58.9
2330 Male, age 80, both hemispheres 63.3
2336 Male, age 61, both hemispheres 62.5
2168 Male, age 76, both hemispheres 61.5
2706 Male, age 80, both hemispheres 57.7
2084 Female, age 85, both hemispheres 49.5
Inferior olive
nTPM: 63.8
2178 Male, age 61, both hemispheres 80.6
2628 Female, age 91, both hemispheres 67.5
2563 Male, age 74, both hemispheres 63.9
2085 Female, age 85, both hemispheres 57.4
2379 Male, age 80, both hemispheres 49.4
Kolliker-Fuse nucleus
nTPM: 65.2
2793 Female, age 91, left hemisphere 108.4
2163 Male, age 80, both hemispheres 54.0
2315 Male, age 76, right hemisphere 33.2
Lateral lemniscal nuclei
nTPM: 64.3
2320 Female, age 91, left hemisphere 89.6
2169 Male, age 76, both hemispheres 61.8
2036 Male, age 80, both hemispheres 60.6
2746 Female, age 85, left hemisphere 59.8
2453 Male, age 74, right hemisphere 49.7
Lateral medullary reticular nucleus
nTPM: 70.5
2852 Male, age 80, both hemispheres 88.3
2044 Male, age 76, both hemispheres 75.4
2374 Male, age 61, both hemispheres 73.9
2305 Male, age 74, both hemispheres 73.2
2190 Female, age 85, both hemispheres 61.3
2804 Female, age 91, both hemispheres 51.0
Lateral parabrachial nucleus
nTPM: 62.2
2792 Male, age 76, both hemispheres 114.6
2013 Male, age 80, both hemispheres 62.3
2139 Female, age 85, right hemisphere 37.2
2790 Male, age 61, both hemispheres 34.7
Lateral vestibular nucleus
nTPM: 64.9
2311 Male, age 80, both hemispheres 68.8
2184 Male, age 76, both hemispheres 60.9
Locus coeruleus
nTPM: 24.6
2720 Male, age 74, both hemispheres 33.9
2162 Male, age 80, both hemispheres 33.3
2317 Female, age 72, unknown 26.3
2123 Female, age 91, both hemispheres 25.3
2014 Male, age 55, unknown 22.3
1980 Male, age 76, both hemispheres 17.9
2788 Male, age 74, unknown 13.3
Medial olivary nucleus
nTPM: 90.0
1962 Male, age 76, both hemispheres 119.1
1943 Male, age 61, both hemispheres 104.7
2851 Male, age 80, both hemispheres 68.1
2138 Female, age 91, both hemispheres 68.0
Medial parabrachial nucleus
nTPM: 69.7
2170 Female, age 91, both hemispheres 103.0
2463 Female, age 85, right hemisphere 80.6
2854 Male, age 80, both hemispheres 68.2
2786 Male, age 76, both hemispheres 63.8
2156 Male, age 61, both hemispheres 32.9
Medial periolivary nuclei
nTPM: 61.1
2081 Male, age 80, both hemispheres 77.1
2458 Female, age 91, both hemispheres 76.0
2791 Male, age 74, right hemisphere 59.4
2063 Male, age 76, both hemispheres 54.8
2171 Female, age 85, both hemispheres 38.4
Medial vestibular nucleus
nTPM: 56.0
2801 Male, age 74, both hemispheres 78.5
2803 Female, age 91, both hemispheres 67.3
2093 Male, age 80, both hemispheres 65.3
2624 Male, age 61, both hemispheres 58.8
2743 Female, age 85, both hemispheres 40.5
2134 Male, age 76, both hemispheres 25.5
Motor facial nucleus
nTPM: 60.5
2126 Male, age 61, both hemispheres 79.7
2697 Female, age 85, both hemispheres 73.6
2365 Male, age 74, right hemisphere 63.6
2795 Female, age 91, both hemispheres 52.3
2062 Male, age 76, both hemispheres 47.5
2327 Male, age 80, both hemispheres 46.5
Motor hypoglossal nucleus
nTPM: 54.4
2182 Male, age 80, both hemispheres 88.8
2125 Female, age 91, both hemispheres 72.0
2132 Female, age 85, both hemispheres 64.6
2461 Male, age 61, both hemispheres 27.4
2277 Male, age 76, both hemispheres 19.2
Motor trigeminal nucleus
nTPM: 63.2
2321 Female, age 91, both hemispheres 81.4
2560 Male, age 74, both hemispheres 73.3
2079 Male, age 80, both hemispheres 59.1
2309 Male, age 76, both hemispheres 58.4
2335 Male, age 61, both hemispheres 43.8
Nuclei of the trapezoid body
nTPM: 56.4
2166 Male, age 80, both hemispheres 71.0
2159 Male, age 61, both hemispheres 65.0
2368 Female, age 91, both hemispheres 59.8
1983 Male, age 76, both hemispheres 53.6
2735 Female, age 85, both hemispheres 32.8
Nucleus ambiguus
nTPM: 92.8
2071 Male, age 76, both hemispheres 111.2
2096 Female, age 85, both hemispheres 74.4
Nucleus cuneatus
nTPM: 59.3
2100 Male, age 76, both hemispheres 80.0
2380 Male, age 80, both hemispheres 72.1
2808 Female, age 85, both hemispheres 67.9
2564 Male, age 74, both hemispheres 49.1
2805 Female, age 91, both hemispheres 47.8
2562 Male, age 61, both hemispheres 39.2
Nucleus gracilis
nTPM: 55.8
2382 Male, age 80, both hemispheres 76.5
2627 Male, age 74, both hemispheres 48.1
2299 Female, age 85, both hemispheres 42.8
Nucleus raphe magnus
nTPM: 59.3
2051 Male, age 76, both hemispheres 76.2
2459 Female, age 91, both hemispheres 72.1
2160 Male, age 61, both hemispheres 61.7
2328 Male, age 80, both hemispheres 58.5
2455 Male, age 74, both hemispheres 54.8
2172 Female, age 85, both hemispheres 32.5
Nucleus raphe obscurus
nTPM: 100.3
2142 Male, age 76, midline 113.1
2845 Female, age 85, midline 105.1
2800 Male, age 61, midline 82.6
Nucleus raphe pallidus
nTPM: 92.3
2145 Male, age 76, midline 125.4
1924 Male, age 61, midline 76.0
2183 Male, age 80, midline 75.4
Nucleus tractus solitarii
nTPM: 18.1
2307 Male, age 80, both hemispheres 24.3
2656 Male, age 76, both hemispheres 20.3
2191 Female, age 85, both hemispheres 16.2
2144 Female, age 91, right hemisphere 11.5
Paramedian reticular nucleus
nTPM: 57.4
2057 Male, age 80, both hemispheres 64.3
2052 Male, age 76, both hemispheres 62.4
2050 Female, age 85, both hemispheres 60.2
2313 Male, age 61, both hemispheres 42.7
Parvicellular reticular nuclei
nTPM: 72.3
2095 Male, age 76, both hemispheres 96.1
2119 Male, age 80, both hemispheres 67.8
2558 Male, age 74, both hemispheres 53.0
Parvicellular reticular nuclei, medullary
nTPM: 47.2
2189 Female, age 91, both hemispheres 62.3
2091 Female, age 85, both hemispheres 41.2
2181 Male, age 80, left hemisphere 38.1
Peritrigeminal nucleus
nTPM: 65.6
2136 Male, age 76, both hemispheres 72.9
2179 Male, age 61, both hemispheres 71.0
2067 Female, age 85, both hemispheres 52.8
Pontine nuclei
nTPM: 76.1
2454 Male, age 74, left hemisphere 96.6
2319 Female, age 91, both hemispheres 94.7
1968 Male, age 76, left hemisphere 80.4
2109 Female, age 72, unknown 76.5
2115 Male, age 80, left hemisphere 72.5
2727 Male, age 61, right hemisphere 71.8
1863 Male, age 55, unknown 62.4
2787 Female, age 85, both hemispheres 54.1
Pontine raphe nucleus
nTPM: 41.2
2122 Female, age 85, midline 46.5
2853 Male, age 76, midline 35.9
Posteroventral cochlear nucleus
nTPM: 65.7
2135 Female, age 91, both hemispheres 100.5
2341 Male, age 80, both hemispheres 76.7
2070 Male, age 76, both hemispheres 72.8
2752 Female, age 85, both hemispheres 39.6
2371 Male, age 61, both hemispheres 39.0
Prepositus hypoglossal nucleus
nTPM: 54.6
2855 Female, age 85, right hemisphere 72.9
2086 Male, age 80, both hemispheres 36.3
Principal sensory trigeminal nucleus
nTPM: 66.8
2367 Female, age 91, left hemisphere 97.7
2158 Male, age 61, both hemispheres 65.0
2008 Male, age 80, left hemisphere 52.3
2324 Male, age 76, both hemispheres 52.2
Reticular pontine nucleus, caudal
nTPM: 76.9
2457 Female, age 91, both hemispheres 86.5
2559 Male, age 74, both hemispheres 85.4
2092 Male, age 76, both hemispheres 81.5
2332 Male, age 80, right hemisphere 53.9
Reticular pontine nucleus, oral
nTPM: 80.2
2366 Female, age 91, both hemispheres 101.3
2361 Male, age 74, both hemispheres 95.0
2167 Male, age 76, both hemispheres 71.0
1939 Male, age 80, both hemispheres 69.0
2012 Female, age 85, both hemispheres 64.7
Reticulotegmental nucleus
nTPM: 55.0
2322 Female, age 91, both hemispheres 70.7
2333 Male, age 80, both hemispheres 61.8
2452 Male, age 74, both hemispheres 54.7
2325 Male, age 76, both hemispheres 32.7
Spinal trigeminal nucleus, caudal
nTPM: 58.7
2312 Male, age 61, both hemispheres 72.3
2447 Male, age 76, both hemispheres 69.2
2308 Male, age 80, both hemispheres 58.8
2390 Female, age 91, both hemispheres 54.9
2642 Male, age 74, both hemispheres 38.2
Spinal trigeminal nucleus, interpolar
nTPM: 43.9
2389 Female, age 91, both hemispheres 52.9
2033 Male, age 80, both hemispheres 52.3
2066 Male, age 76, right hemisphere 45.5
2386 Female, age 85, both hemispheres 41.9
2625 Male, age 61, both hemispheres 27.0
Spinal trigeminal nucleus, oral
nTPM: 50.7
2164 Male, age 80, both hemispheres 64.3
1978 Male, age 76, both hemispheres 50.5
2737 Female, age 85, both hemispheres 37.4
Spinal vestibular nucleus
nTPM: 60.4
2748 Male, age 76, both hemispheres 84.4
2806 Female, age 85, both hemispheres 65.7
2384 Male, age 74, both hemispheres 59.4
2186 Female, age 91, both hemispheres 56.4
2780 Male, age 80, both hemispheres 56.1
2796 Male, age 61, both hemispheres 40.3
Subcoeruleus area
nTPM: 60.0
2369 Female, age 85, left hemisphere 100.2
2089 Male, age 76, left hemisphere 70.4
1958 Male, age 80, both hemispheres 57.9
2323 Female, age 91, left hemisphere 36.7
2451 Male, age 74, both hemispheres 34.6
Superior olive
nTPM: 68.8
2020 Male, age 76, both hemispheres 91.8
2561 Female, age 91, both hemispheres 67.7
2329 Male, age 80, right hemisphere 66.7
2364 Male, age 74, right hemisphere 65.2
1875 Female, age 85, both hemispheres 52.7
Superior vestibular nucleus
nTPM: 46.2
2061 Male, age 76, both hemispheres 54.1
2015 Male, age 80, both hemispheres 53.4
2383 Male, age 74, both hemispheres 31.0
Ventral medullary reticular nucleus
nTPM: 68.2
2060 Male, age 76, both hemispheres 74.1
2372 Male, age 61, both hemispheres 62.3
Ventral periolivary nuclei
nTPM: 60.2
2023 Male, age 76, both hemispheres 92.9
2165 Male, age 80, both hemispheres 55.7
2794 Female, age 91, left hemisphere 50.7
2130 Female, age 85, both hemispheres 41.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 61.5
2118 Male, age 80, both hemispheres 72.7
2180 Male, age 61, both hemispheres 71.4
1986 Male, age 76, both hemispheres 63.1
2302 Female, age 91, both hemispheres 51.8
2741 Female, age 85, both hemispheres 48.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 63.3
1959 Male, age 76, both hemispheres 76.5
2456 Female, age 91, both hemispheres 74.7
2840 Female, age 85, both hemispheres 66.5
2449 Male, age 74, both hemispheres 62.6
2161 Male, age 80, both hemispheres 55.4
2359 Male, age 61, both hemispheres 43.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 62.8
FF:10182-103D2 60 years, female 74.3
FF:10165-103B3 76 years, female 51.3
Medulla oblongata
Scaled Tags Per Million: 53.7
FF:10038-101F2 18-64 years, mixed 73.4
FF:10174-103C3 60 years, female 47.0
FF:10155-103A2 76 years, female 40.7
Pons
Scaled Tags Per Million: 60.4
FF:10033-101E6 18-54 years, mixed 60.4

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 11.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 11.0
Samples: 4

Max nTPM: 15.5
Min nTPM: 8.5
Sample A Female 9.8
Sample B Female 8.5
Sample C Male 15.5
Sample D Male 10.0
Pons
nTPM: 6.4
Samples: 4

Max nTPM: 8.5
Min nTPM: 4.0
Sample A Female 4.0
Sample B Female 5.4
Sample C Male 7.7
Sample D Male 8.5

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 8.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 8.2
Samples: 4

Max nTPM: 8.9
Min nTPM: 7.2
Sample A Male 8.1
Sample B Male 7.2
Sample C Female 8.4
Sample D Female 8.9

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 0.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.8
73617582 Antisense, RP_051130_02_A08, Mouse strain C57BL/6J (56 days, male) 1.3
69059801 Antisense, RP_050317_04_A06, Mouse strain C57BL/6J (56 days, male) 0.8
77620357 Antisense, RP_070205_01_C04, Mouse strain C57BL/6J (56 days, male) 0.2
Pons
Expression energy: 0.4
73617582 Antisense, RP_051130_02_A08, Mouse strain C57BL/6J (56 days, male) 0.5
69059801 Antisense, RP_050317_04_A06, Mouse strain C57BL/6J (56 days, male) 0.5
77620357 Antisense, RP_070205_01_C04, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

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