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SMARCD3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:105.3 nTPM
HPA:105.3 nTPM
GTEx:89.1 nTPM
FANTOM5:68.5 Scaled Tags Per Million
Pig:31.1 nTPM
Mouse:50.2 nTPM
Allen mouse:8.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063955
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 105.3
Sample id Sample description nTPM
Hippocampus
nTPM: 85.0
1898 Male, age 80, left hemisphere 89.3
2148 Female, age 91, left hemisphere 88.6
2529 Female, age 94, left hemisphere 88.6
2621 Female, age 67, right hemisphere 82.8
1855 Male, age 76, left hemisphere 82.4
1911 Female, age 85, right hemisphere 78.5
Dentate gyrus
nTPM: 82.6
1927 Female, age 91, both hemispheres 92.1
2530 Female, age 94, left hemisphere 86.1
2010 Male, age 76, both hemispheres 84.3
2528 Male, age 74, both hemispheres 80.3
2246 Female, age 85, both hemispheres 77.6
2531 Female, age 67, both hemispheres 75.1
Entorhinal gyrus
nTPM: 105.3
2613 Female, age 94, left hemisphere 123.8
1938 Female, age 85, left hemisphere 110.6
1787 Male, age 76, left hemisphere 106.8
2764 Male, age 80, right hemisphere 104.6
2686 Male, age 75, right hemisphere 100.4
2117 Female, age 91, right hemisphere 85.9
Hippocampus, CA1
nTPM: 85.0
2749 Male, age 80, left hemisphere 95.0
2527 Male, age 74, both hemispheres 87.6
2045 Male, age 76, both hemispheres 83.8
2082 Female, age 91, right hemisphere 82.4
1873 Female, age 85, both hemispheres 76.0
Hippocampus, CA2
nTPM: 83.7
1963 Male, age 80, left hemisphere 94.8
2437 Female, age 94, left hemisphere 86.2
2113 Female, age 91, right hemisphere 84.1
1892 Male, age 76, both hemispheres 82.4
1940 Female, age 85, left hemisphere 77.6
2249 Male, age 74, both hemispheres 77.3
Hippocampus, CA3
nTPM: 81.7
2137 Male, age 80, left hemisphere 90.4
2861 Female, age 67, both hemispheres 85.0
1867 Male, age 76, both hemispheres 83.0
2436 Male, age 74, both hemispheres 78.0
1891 Female, age 85, both hemispheres 77.8
2620 Female, age 94, left hemisphere 75.8
Parahippocampal cortex
nTPM: 93.9
1933 Female, age 85, both hemispheres 102.6
1850 Male, age 80, both hemispheres 99.9
1990 Female, age 91, right hemisphere 97.2
2018 Male, age 76, both hemispheres 94.5
2622 Female, age 67, right hemisphere 94.0
2692 Male, age 74, both hemispheres 94.0
2245 Female, age 91, both hemispheres 93.5
2250 Female, age 67, right hemisphere 89.6
2693 Female, age 94, both hemispheres 87.4
2532 Female, age 72, left hemisphere 85.9
Perirhinal gyrus
nTPM: 102.2
1847 Female, age 91, left hemisphere 118.3
2521 Female, age 94, right hemisphere 114.2
1794 Male, age 80, right hemisphere 100.0
2848 Male, age 76, right hemisphere 91.3
1841 Female, age 85, right hemisphere 87.3
Subiculum
nTPM: 83.9
2619 Male, age 74, both hemispheres 92.8
1977 Female, age 85, both hemispheres 89.9
2438 Female, age 94, left hemisphere 83.7
1901 Male, age 80, both hemispheres 81.1
2729 Female, age 91, right hemisphere 80.1
2042 Male, age 76, both hemispheres 75.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 89.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 89.1
Samples: 197

Max nTPM: 261.0
Min nTPM: 22.5
Std nTPM: 38.5
Median nTPM: 85.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 261.0
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 192.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 191.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 189.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 186.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 182.6
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 181.6
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 170.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 168.5
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 167.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 163.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.5
FF:10153-102I9 76 years, female 81.5
FF:10169-103B7 60 years, female 55.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 37.3
Min nTPM: 25.5
Sample A Female 37.3
Sample B Female 31.5
Sample C Male 30.3
Sample D Male 25.5
Entorhinal cortex
nTPM: 27.0
Samples: 4

Max nTPM: 33.4
Min nTPM: 21.5
Sample A Female 25.4
Sample B Female 27.5
Sample C Male 33.4
Sample D Male 21.5
Subiculum
nTPM: 28.9
Samples: 4

Max nTPM: 38.0
Min nTPM: 24.0
Sample A Female 38.0
Sample B Female 27.0
Sample C Male 26.5
Sample D Male 24.0
Ventral hippocampus
nTPM: 29.9
Samples: 4

Max nTPM: 37.4
Min nTPM: 24.5
Sample A Female 26.7
Sample B Female 24.5
Sample C Male 37.4
Sample D Male 30.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 50.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.5
Samples: 4

Max nTPM: 47.8
Min nTPM: 39.5
Sample A Male 39.5
Sample B Male 42.9
Sample C Female 47.8
Sample D Female 47.6
Hippocampal formation
nTPM: 50.2
Samples: 4

Max nTPM: 63.0
Min nTPM: 43.8
Sample A Male 63.0
Sample B Male 49.1
Sample C Female 44.9
Sample D Female 43.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.9
100143575 Antisense, RP_110407_01_F08, Mouse strain C57BL/6J (56 days, male) 8.9

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The Human Protein Atlas

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