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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:112.8 nTPM
HPA:112.8 nTPM
GTEx:68.0 nTPM
FANTOM5:74.3 Scaled Tags Per Million
Pig:17.5 nTPM
Mouse:19.2 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055721
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 112.8
Sample id Sample description nTPM
Hippocampus
nTPM: 112.0
1898 Male, age 80, left hemisphere 117.0
2529 Female, age 94, left hemisphere 112.5
1855 Male, age 76, left hemisphere 112.3
1911 Female, age 85, right hemisphere 111.7
2148 Female, age 91, left hemisphere 111.2
2621 Female, age 67, right hemisphere 107.4
Dentate gyrus
nTPM: 109.1
2246 Female, age 85, both hemispheres 111.5
2528 Male, age 74, both hemispheres 111.2
2530 Female, age 94, left hemisphere 109.8
2010 Male, age 76, both hemispheres 109.2
1927 Female, age 91, both hemispheres 108.6
2531 Female, age 67, both hemispheres 104.5
Entorhinal gyrus
nTPM: 110.9
2117 Female, age 91, right hemisphere 115.7
1938 Female, age 85, left hemisphere 114.5
1787 Male, age 76, left hemisphere 111.1
2764 Male, age 80, right hemisphere 110.8
2686 Male, age 75, right hemisphere 106.9
2613 Female, age 94, left hemisphere 106.5
Hippocampus, CA1
nTPM: 111.0
2527 Male, age 74, both hemispheres 114.4
1873 Female, age 85, both hemispheres 113.1
2749 Male, age 80, left hemisphere 111.7
2082 Female, age 91, right hemisphere 109.5
2045 Male, age 76, both hemispheres 106.1
Hippocampus, CA2
nTPM: 110.5
2249 Male, age 74, both hemispheres 113.0
2113 Female, age 91, right hemisphere 111.3
1940 Female, age 85, left hemisphere 110.7
1963 Male, age 80, left hemisphere 109.7
2437 Female, age 94, left hemisphere 109.4
1892 Male, age 76, both hemispheres 108.7
Hippocampus, CA3
nTPM: 109.8
2436 Male, age 74, both hemispheres 113.6
1891 Female, age 85, both hemispheres 112.5
2137 Male, age 80, left hemisphere 111.2
1867 Male, age 76, both hemispheres 109.0
2620 Female, age 94, left hemisphere 107.3
2861 Female, age 67, both hemispheres 105.4
Parahippocampal cortex
nTPM: 111.3
1933 Female, age 85, both hemispheres 115.1
1850 Male, age 80, both hemispheres 114.2
1990 Female, age 91, right hemisphere 111.6
2692 Male, age 74, both hemispheres 111.5
2245 Female, age 91, both hemispheres 111.4
2250 Female, age 67, right hemisphere 110.6
2622 Female, age 67, right hemisphere 110.2
2532 Female, age 72, left hemisphere 110.1
2018 Male, age 76, both hemispheres 109.6
2693 Female, age 94, both hemispheres 109.0
Perirhinal gyrus
nTPM: 112.8
1794 Male, age 80, right hemisphere 116.3
1841 Female, age 85, right hemisphere 114.5
1847 Female, age 91, left hemisphere 113.6
2521 Female, age 94, right hemisphere 110.9
2848 Male, age 76, right hemisphere 108.8
Subiculum
nTPM: 112.5
2619 Male, age 74, both hemispheres 114.5
1901 Male, age 80, both hemispheres 113.9
1977 Female, age 85, both hemispheres 113.2
2729 Female, age 91, right hemisphere 113.0
2438 Female, age 94, left hemisphere 110.6
2042 Male, age 76, both hemispheres 109.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 68.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 68.0
Samples: 197

Max nTPM: 120.2
Min nTPM: 31.7
Std nTPM: 14.7
Median nTPM: 66.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 120.2
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 120.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 113.3
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 102.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 100.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 97.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 97.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 95.8
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 94.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 93.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 93.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.3
FF:10153-102I9 76 years, female 90.1
FF:10169-103B7 60 years, female 58.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.5
Samples: 4

Max nTPM: 23.1
Min nTPM: 11.1
Sample A Female 23.1
Sample B Female 15.1
Sample C Male 20.5
Sample D Male 11.1
Entorhinal cortex
nTPM: 13.7
Samples: 4

Max nTPM: 16.4
Min nTPM: 9.8
Sample A Female 13.6
Sample B Female 16.4
Sample C Male 15.1
Sample D Male 9.8
Subiculum
nTPM: 15.9
Samples: 4

Max nTPM: 19.6
Min nTPM: 13.5
Sample A Female 19.6
Sample B Female 16.2
Sample C Male 13.5
Sample D Male 14.1
Ventral hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 21.8
Min nTPM: 13.6
Sample A Female 18.7
Sample B Female 13.8
Sample C Male 21.8
Sample D Male 13.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 20.7
Min nTPM: 17.1
Sample A Male 20.7
Sample B Male 18.3
Sample C Female 19.4
Sample D Female 17.1
Hippocampal formation
nTPM: 19.2
Samples: 4

Max nTPM: 21.9
Min nTPM: 16.0
Sample A Male 21.9
Sample B Male 18.4
Sample C Female 16.0
Sample D Female 20.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
76097729 Antisense, RP_060626_01_E01, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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