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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:50.3 nTPM
HPA:50.3 nTPM
GTEx:60.6 nTPM
FANTOM5:132.9 Scaled Tags Per Million
Pig:48.8 nTPM
Mouse:74.7 nTPM
Allen mouse:7.9 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 50.3
Sample id Sample description nTPM
Amygdala
nTPM: 45.6
2814 Male, age 76, right hemisphere 52.1
2695 Female, age 67, right hemisphere 48.2
1987 Female, age 91, left hemisphere 46.2
2514 Male, age 75, right hemisphere 40.9
2517 Female, age 94, left hemisphere 40.7
Basal amygdala
nTPM: 50.3
2243 Female, age 91, right hemisphere 53.6
2685 Female, age 94, left hemisphere 52.7
1955 Male, age 76, both hemispheres 49.2
2609 Male, age 75, right hemisphere 49.0
2827 Female, age 67, right hemisphere 48.6
2110 Male, age 80, left hemisphere 48.4
Central amygdala
nTPM: 48.2
2826 Female, age 94, left hemisphere 53.4
1905 Male, age 76, both hemispheres 50.7
2239 Male, age 80, left hemisphere 48.6
2515 Male, age 75, right hemisphere 47.0
2701 Female, age 91, right hemisphere 41.6
Corticomedial amygdala
nTPM: 48.5
2829 Male, age 80, left hemisphere 55.8
2535 Female, age 67, right hemisphere 49.6
2429 Female, age 94, left hemisphere 48.4
2242 Female, age 91, right hemisphere 46.3
2240 Male, age 76, both hemispheres 45.6
2428 Male, age 75, right hemisphere 45.0
Lateral amygdala
nTPM: 49.1
2534 Female, age 94, left hemisphere 56.2
1883 Male, age 76, both hemispheres 50.8
2256 Male, age 80, left hemisphere 49.4
2255 Female, age 91, right hemisphere 49.1
2830 Female, age 67, right hemisphere 45.3
2516 Male, age 75, right hemisphere 43.9
Stria terminalis, bed nucleus
nTPM: 48.8
2486 Female, age 94, both hemispheres 54.9
1974 Female, age 91, both hemispheres 53.4
2201 Male, age 74, unknown 38.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 60.6
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 60.6
Samples: 152

Max nTPM: 103.7
Min nTPM: 17.4
Std nTPM: 15.8
Median nTPM: 60.1
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 103.7
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 100.0
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 99.2
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 91.6
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 89.1
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 88.5
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 86.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 86.3
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 86.0
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 84.7
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 83.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 132.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 132.9
FF:10151-102I7 76 years, female 132.9

AMYGDALA - Pig RNA-seqi
Average nTPM 48.8
Pig sample Sample description nTPM
Amygdala
nTPM: 48.8
Samples: 4

Max nTPM: 57.7
Min nTPM: 42.9
Sample A Female 57.7
Sample B Female 42.9
Sample C Male 49.0
Sample D Male 45.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 74.7
Mouse sample Sample description nTPM
Amygdala
nTPM: 74.6
Samples: 4

Max nTPM: 80.7
Min nTPM: 71.9
Sample A Male 80.7
Sample B Male 71.9
Sample C Female 72.1
Sample D Female 73.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 7.9
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 7.9
513243 Antisense, RP_040810_01_D11, Mouse strain C57BL/6J (56 days, male) 7.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.