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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:54.6 nTPM
HPA:54.6 nTPM
GTEx:52.3 nTPM
FANTOM5:110.6 Scaled Tags Per Million
Pig:59.2 nTPM
Mouse:81.6 nTPM
Allen mouse:7.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB046446
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 54.6
Sample id Sample description nTPM
Hippocampus
nTPM: 47.4
2621 Female, age 67, right hemisphere 50.0
1898 Male, age 80, left hemisphere 49.9
2148 Female, age 91, left hemisphere 49.3
2529 Female, age 94, left hemisphere 46.2
1911 Female, age 85, right hemisphere 44.9
1855 Male, age 76, left hemisphere 44.2
Dentate gyrus
nTPM: 45.8
1927 Female, age 91, both hemispheres 49.9
2530 Female, age 94, left hemisphere 47.6
2531 Female, age 67, both hemispheres 46.9
2246 Female, age 85, both hemispheres 44.3
2010 Male, age 76, both hemispheres 43.2
2528 Male, age 74, both hemispheres 42.8
Entorhinal gyrus
nTPM: 53.5
2613 Female, age 94, left hemisphere 61.8
2764 Male, age 80, right hemisphere 55.1
2686 Male, age 75, right hemisphere 54.7
1938 Female, age 85, left hemisphere 54.3
1787 Male, age 76, left hemisphere 49.7
2117 Female, age 91, right hemisphere 45.1
Hippocampus, CA1
nTPM: 47.4
2749 Male, age 80, left hemisphere 56.6
1873 Female, age 85, both hemispheres 46.1
2527 Male, age 74, both hemispheres 45.3
2082 Female, age 91, right hemisphere 44.6
2045 Male, age 76, both hemispheres 44.5
Hippocampus, CA2
nTPM: 47.1
1963 Male, age 80, left hemisphere 55.2
1892 Male, age 76, both hemispheres 52.8
2437 Female, age 94, left hemisphere 49.2
2113 Female, age 91, right hemisphere 45.3
1940 Female, age 85, left hemisphere 41.4
2249 Male, age 74, both hemispheres 38.6
Hippocampus, CA3
nTPM: 48.4
2861 Female, age 67, both hemispheres 57.6
2137 Male, age 80, left hemisphere 54.6
2620 Female, age 94, left hemisphere 52.2
1867 Male, age 76, both hemispheres 45.1
1891 Female, age 85, both hemispheres 42.7
2436 Male, age 74, both hemispheres 38.3
Parahippocampal cortex
nTPM: 50.6
2622 Female, age 67, right hemisphere 55.1
2245 Female, age 91, both hemispheres 52.9
1850 Male, age 80, both hemispheres 52.7
2693 Female, age 94, both hemispheres 52.7
2692 Male, age 74, both hemispheres 51.8
1933 Female, age 85, both hemispheres 51.4
1990 Female, age 91, right hemisphere 50.0
2532 Female, age 72, left hemisphere 48.4
2250 Female, age 67, right hemisphere 48.1
2018 Male, age 76, both hemispheres 43.0
Perirhinal gyrus
nTPM: 54.6
1847 Female, age 91, left hemisphere 59.5
1794 Male, age 80, right hemisphere 59.3
2521 Female, age 94, right hemisphere 53.2
1841 Female, age 85, right hemisphere 50.7
2848 Male, age 76, right hemisphere 50.3
Subiculum
nTPM: 43.0
1977 Female, age 85, both hemispheres 47.0
2619 Male, age 74, both hemispheres 46.0
1901 Male, age 80, both hemispheres 44.3
2729 Female, age 91, right hemisphere 42.7
2438 Female, age 94, left hemisphere 40.0
2042 Male, age 76, both hemispheres 37.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 52.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 52.3
Samples: 197

Max nTPM: 105.5
Min nTPM: 19.7
Std nTPM: 15.2
Median nTPM: 51.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 105.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 103.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 102.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 96.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 91.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 90.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 89.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 88.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 86.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 79.4
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 78.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 110.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 110.6
FF:10169-103B7 60 years, female 119.2
FF:10153-102I9 76 years, female 102.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 50.7
Samples: 4

Max nTPM: 57.8
Min nTPM: 40.5
Sample A Female 57.8
Sample B Female 54.0
Sample C Male 50.6
Sample D Male 40.5
Entorhinal cortex
nTPM: 59.2
Samples: 4

Max nTPM: 67.8
Min nTPM: 52.0
Sample A Female 58.0
Sample B Female 59.0
Sample C Male 67.8
Sample D Male 52.0
Subiculum
nTPM: 52.5
Samples: 4

Max nTPM: 67.8
Min nTPM: 39.6
Sample A Female 67.8
Sample B Female 49.9
Sample C Male 52.8
Sample D Male 39.6
Ventral hippocampus
nTPM: 51.3
Samples: 4

Max nTPM: 67.3
Min nTPM: 41.6
Sample A Female 44.3
Sample B Female 41.6
Sample C Male 67.3
Sample D Male 52.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 81.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 81.6
Samples: 4

Max nTPM: 98.0
Min nTPM: 75.1
Sample A Male 76.5
Sample B Male 75.1
Sample C Female 76.9
Sample D Female 98.0
Hippocampal formation
nTPM: 67.3
Samples: 4

Max nTPM: 68.5
Min nTPM: 66.0
Sample A Male 68.3
Sample B Male 66.0
Sample C Female 68.5
Sample D Female 66.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.7
513243 Antisense, RP_040810_01_D11, Mouse strain C57BL/6J (56 days, male) 7.7

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The Human Protein Atlas

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