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PDAP1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:34.4 nTPM
HPA:34.4 nTPM
GTEx:28.2 nTPM
FANTOM5:108.9 Scaled Tags Per Million
Pig:73.4 nTPM
Mouse:42.4 nTPM
Allen mouse:8.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050294Antibody HPA060836Antibody CAB021103
Glial cells LowNot detectedNot detected
Neuronal cells MediumMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.4
Sample id Sample description nTPM
Hippocampus
nTPM: 34.4
2529 Female, age 94, left hemisphere 35.3
2621 Female, age 67, right hemisphere 35.2
1898 Male, age 80, left hemisphere 34.9
2148 Female, age 91, left hemisphere 34.5
1855 Male, age 76, left hemisphere 33.7
1911 Female, age 85, right hemisphere 32.5
Dentate gyrus
nTPM: 34.3
2530 Female, age 94, left hemisphere 35.6
2010 Male, age 76, both hemispheres 35.0
2528 Male, age 74, both hemispheres 34.1
1927 Female, age 91, both hemispheres 33.9
2246 Female, age 85, both hemispheres 33.5
2531 Female, age 67, both hemispheres 33.5
Entorhinal gyrus
nTPM: 33.9
2686 Male, age 75, right hemisphere 34.5
2117 Female, age 91, right hemisphere 34.4
2764 Male, age 80, right hemisphere 34.3
1787 Male, age 76, left hemisphere 34.0
1938 Female, age 85, left hemisphere 33.6
2613 Female, age 94, left hemisphere 32.5
Hippocampus, CA1
nTPM: 34.2
2749 Male, age 80, left hemisphere 35.2
1873 Female, age 85, both hemispheres 35.0
2082 Female, age 91, right hemisphere 34.2
2527 Male, age 74, both hemispheres 33.6
2045 Male, age 76, both hemispheres 33.2
Hippocampus, CA2
nTPM: 34.0
1892 Male, age 76, both hemispheres 35.4
1963 Male, age 80, left hemisphere 35.2
2437 Female, age 94, left hemisphere 34.0
2113 Female, age 91, right hemisphere 33.8
2249 Male, age 74, both hemispheres 33.8
1940 Female, age 85, left hemisphere 31.9
Hippocampus, CA3
nTPM: 34.1
1867 Male, age 76, both hemispheres 35.0
2861 Female, age 67, both hemispheres 34.9
2620 Female, age 94, left hemisphere 34.2
1891 Female, age 85, both hemispheres 34.0
2137 Male, age 80, left hemisphere 33.7
2436 Male, age 74, both hemispheres 32.7
Parahippocampal cortex
nTPM: 33.3
2692 Male, age 74, both hemispheres 34.1
1990 Female, age 91, right hemisphere 33.9
2622 Female, age 67, right hemisphere 33.7
1850 Male, age 80, both hemispheres 33.6
2245 Female, age 91, both hemispheres 33.5
2532 Female, age 72, left hemisphere 33.5
2250 Female, age 67, right hemisphere 32.8
2693 Female, age 94, both hemispheres 32.7
1933 Female, age 85, both hemispheres 32.6
2018 Male, age 76, both hemispheres 32.6
Perirhinal gyrus
nTPM: 33.2
1794 Male, age 80, right hemisphere 34.1
2848 Male, age 76, right hemisphere 33.5
1847 Female, age 91, left hemisphere 33.0
1841 Female, age 85, right hemisphere 32.8
2521 Female, age 94, right hemisphere 32.7
Subiculum
nTPM: 34.2
2729 Female, age 91, right hemisphere 34.8
1901 Male, age 80, both hemispheres 34.5
2619 Male, age 74, both hemispheres 34.4
2042 Male, age 76, both hemispheres 34.1
1977 Female, age 85, both hemispheres 33.9
2438 Female, age 94, left hemisphere 33.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.2
Samples: 197

Max nTPM: 164.9
Min nTPM: 13.9
Std nTPM: 11.2
Median nTPM: 26.9
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 164.9
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 75.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 42.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 41.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 39.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 37.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 37.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 36.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 35.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 34.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 34.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 108.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 108.9
FF:10153-102I9 76 years, female 130.9
FF:10169-103B7 60 years, female 86.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 73.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 73.4
Samples: 4

Max nTPM: 90.6
Min nTPM: 66.6
Sample A Female 90.6
Sample B Female 66.6
Sample C Male 69.5
Sample D Male 66.9
Entorhinal cortex
nTPM: 62.5
Samples: 4

Max nTPM: 70.8
Min nTPM: 54.0
Sample A Female 60.4
Sample B Female 70.8
Sample C Male 64.7
Sample D Male 54.0
Subiculum
nTPM: 59.1
Samples: 4

Max nTPM: 72.2
Min nTPM: 52.8
Sample A Female 72.2
Sample B Female 53.3
Sample C Male 58.2
Sample D Male 52.8
Ventral hippocampus
nTPM: 66.6
Samples: 4

Max nTPM: 80.8
Min nTPM: 46.2
Sample A Female 61.7
Sample B Female 46.2
Sample C Male 77.7
Sample D Male 80.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 42.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.1
Samples: 4

Max nTPM: 43.4
Min nTPM: 38.5
Sample A Male 39.9
Sample B Male 43.4
Sample C Female 42.4
Sample D Female 38.5
Hippocampal formation
nTPM: 42.4
Samples: 4

Max nTPM: 45.3
Min nTPM: 39.2
Sample A Male 45.3
Sample B Male 43.4
Sample C Female 41.7
Sample D Female 39.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.6
69782891 Antisense, RP_050505_04_A01, Mouse strain C57BL/6J (56 days, male) 8.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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