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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:49.0 nTPM
HPA:49.0 nTPM
GTEx:44.0 nTPM
FANTOM5:53.8 Scaled Tags Per Million
Pig:18.8 nTPM
Mouse:7.1 nTPM
Allen mouse:0.2 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 49.0
Sample id Sample description nTPM
Amygdala
nTPM: 47.5
2695 Female, age 67, right hemisphere 52.8
2514 Male, age 75, right hemisphere 50.0
1987 Female, age 91, left hemisphere 46.2
2517 Female, age 94, left hemisphere 45.3
2814 Male, age 76, right hemisphere 42.9
Basal amygdala
nTPM: 46.6
2609 Male, age 75, right hemisphere 56.5
2827 Female, age 67, right hemisphere 49.9
2243 Female, age 91, right hemisphere 45.3
2110 Male, age 80, left hemisphere 43.5
2685 Female, age 94, left hemisphere 42.5
1955 Male, age 76, both hemispheres 42.1
Central amygdala
nTPM: 45.2
2826 Female, age 94, left hemisphere 48.1
2515 Male, age 75, right hemisphere 47.3
2701 Female, age 91, right hemisphere 45.5
2239 Male, age 80, left hemisphere 43.2
1905 Male, age 76, both hemispheres 42.0
Corticomedial amygdala
nTPM: 44.6
2428 Male, age 75, right hemisphere 53.2
2535 Female, age 67, right hemisphere 44.3
2429 Female, age 94, left hemisphere 43.5
2829 Male, age 80, left hemisphere 43.5
2240 Male, age 76, both hemispheres 41.7
2242 Female, age 91, right hemisphere 41.2
Lateral amygdala
nTPM: 49.0
2516 Male, age 75, right hemisphere 56.8
2830 Female, age 67, right hemisphere 56.6
2255 Female, age 91, right hemisphere 46.7
2256 Male, age 80, left hemisphere 46.5
2534 Female, age 94, left hemisphere 45.8
1883 Male, age 76, both hemispheres 41.6
Stria terminalis, bed nucleus
nTPM: 38.3
2201 Male, age 74, unknown 39.8
1974 Female, age 91, both hemispheres 38.4
2486 Female, age 94, both hemispheres 36.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 44.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 44.0
Samples: 152

Max nTPM: 105.6
Min nTPM: 16.3
Std nTPM: 16.1
Median nTPM: 41.4
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 105.6
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 85.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 83.1
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 83.0
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 81.4
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 76.2
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 75.3
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 70.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 69.3
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 68.8
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 68.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 53.8
FF:10151-102I7 76 years, female 53.8

AMYGDALA - Pig RNA-seqi
Average nTPM 18.8
Pig sample Sample description nTPM
Amygdala
nTPM: 18.8
Samples: 4

Max nTPM: 21.0
Min nTPM: 17.7
Sample A Female 21.0
Sample B Female 17.8
Sample C Male 17.7
Sample D Male 18.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 7.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 7.1
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.3
Sample A Male 6.3
Sample B Male 6.4
Sample C Female 8.2
Sample D Female 7.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.2
77790716 Antisense, RP_070208_04_A08, Mouse strain C57BL/6J (56 days, male) 0.2
69133686 Antisense, RP_050321_02_A10, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.