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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:45.1 nTPM
HPA:45.1 nTPM
GTEx:36.7 nTPM
FANTOM5:41.2 Scaled Tags Per Million
Pig:18.2 nTPM
Mouse:7.6 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA005539
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 45.1
Sample id Sample description nTPM
Hippocampus
nTPM: 43.4
2529 Female, age 94, left hemisphere 46.7
2148 Female, age 91, left hemisphere 43.6
1911 Female, age 85, right hemisphere 42.8
1855 Male, age 76, left hemisphere 42.7
2621 Female, age 67, right hemisphere 42.7
1898 Male, age 80, left hemisphere 42.2
Dentate gyrus
nTPM: 41.3
2010 Male, age 76, both hemispheres 44.4
2528 Male, age 74, both hemispheres 43.9
2246 Female, age 85, both hemispheres 41.6
2530 Female, age 94, left hemisphere 41.4
2531 Female, age 67, both hemispheres 39.6
1927 Female, age 91, both hemispheres 36.9
Entorhinal gyrus
nTPM: 42.7
2117 Female, age 91, right hemisphere 48.1
2686 Male, age 75, right hemisphere 45.2
1787 Male, age 76, left hemisphere 42.0
2764 Male, age 80, right hemisphere 41.4
1938 Female, age 85, left hemisphere 40.1
2613 Female, age 94, left hemisphere 39.4
Hippocampus, CA1
nTPM: 39.8
2527 Male, age 74, both hemispheres 44.6
2082 Female, age 91, right hemisphere 43.8
1873 Female, age 85, both hemispheres 40.7
2045 Male, age 76, both hemispheres 36.5
2749 Male, age 80, left hemisphere 33.5
Hippocampus, CA2
nTPM: 42.1
2113 Female, age 91, right hemisphere 45.4
1963 Male, age 80, left hemisphere 43.8
2249 Male, age 74, both hemispheres 43.7
1940 Female, age 85, left hemisphere 42.6
2437 Female, age 94, left hemisphere 41.7
1892 Male, age 76, both hemispheres 35.4
Hippocampus, CA3
nTPM: 41.5
2436 Male, age 74, both hemispheres 47.9
1891 Female, age 85, both hemispheres 45.7
2861 Female, age 67, both hemispheres 44.2
1867 Male, age 76, both hemispheres 40.1
2620 Female, age 94, left hemisphere 36.5
2137 Male, age 80, left hemisphere 34.5
Parahippocampal cortex
nTPM: 41.6
2692 Male, age 74, both hemispheres 48.2
2018 Male, age 76, both hemispheres 44.2
2622 Female, age 67, right hemisphere 43.7
1990 Female, age 91, right hemisphere 42.3
1933 Female, age 85, both hemispheres 41.2
1850 Male, age 80, both hemispheres 40.2
2245 Female, age 91, both hemispheres 39.5
2532 Female, age 72, left hemisphere 39.4
2693 Female, age 94, both hemispheres 38.9
2250 Female, age 67, right hemisphere 38.7
Perirhinal gyrus
nTPM: 38.3
1847 Female, age 91, left hemisphere 39.6
2521 Female, age 94, right hemisphere 38.9
1841 Female, age 85, right hemisphere 38.4
1794 Male, age 80, right hemisphere 37.3
2848 Male, age 76, right hemisphere 37.1
Subiculum
nTPM: 45.1
2042 Male, age 76, both hemispheres 47.1
2619 Male, age 74, both hemispheres 46.8
2438 Female, age 94, left hemisphere 45.2
2729 Female, age 91, right hemisphere 44.9
1901 Male, age 80, both hemispheres 43.2
1977 Female, age 85, both hemispheres 43.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.7
Samples: 197

Max nTPM: 76.3
Min nTPM: 11.1
Std nTPM: 13.8
Median nTPM: 34.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 76.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 70.5
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 69.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 65.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 65.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 65.2
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 65.1
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 62.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 61.9
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 61.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 59.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.2
FF:10153-102I9 76 years, female 53.1
FF:10169-103B7 60 years, female 29.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 18.3
Min nTPM: 11.2
Sample A Female 18.3
Sample B Female 17.2
Sample C Male 16.4
Sample D Male 11.2
Entorhinal cortex
nTPM: 16.8
Samples: 4

Max nTPM: 19.0
Min nTPM: 14.4
Sample A Female 19.0
Sample B Female 17.2
Sample C Male 16.4
Sample D Male 14.4
Subiculum
nTPM: 17.8
Samples: 4

Max nTPM: 19.8
Min nTPM: 15.3
Sample A Female 19.8
Sample B Female 18.1
Sample C Male 17.9
Sample D Male 15.3
Ventral hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 21.7
Min nTPM: 15.6
Sample A Female 15.6
Sample B Female 17.9
Sample C Male 21.7
Sample D Male 17.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.4
Samples: 4

Max nTPM: 7.2
Min nTPM: 5.6
Sample A Male 6.7
Sample B Male 5.6
Sample C Female 7.2
Sample D Female 6.2
Hippocampal formation
nTPM: 7.6
Samples: 4

Max nTPM: 9.3
Min nTPM: 5.7
Sample A Male 5.7
Sample B Male 6.3
Sample C Female 9.0
Sample D Female 9.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
77790716 Antisense, RP_070208_04_A08, Mouse strain C57BL/6J (56 days, male) 0.3
69133686 Antisense, RP_050321_02_A10, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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