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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		52.845
RNA expressioni
Consensus:36.2 nTPM
HPA:36.2 nTPM
GTEx:34.0 nTPM
FANTOM5:55.1 Scaled Tags Per Million
Pig:25.6 nTPM
Mouse:63.9 nTPM
Allen mouse:20.0 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA006385
Amygdala mean intensity 52.845
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 38.355
Basal medial amygdaloid nucleus 27.953
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 27.751
Cortical amygdala 52.845
Central amygdala 32.314
Medial amygdaloid nucleus 37.032

AMYGDALA - HPA Brain RNA-seq
Max nTPM 36.2
Sample id Sample description nTPM
Amygdala
nTPM: 33.3
2695 Female, age 67, right hemisphere 34.4
2814 Male, age 76, right hemisphere 33.9
2514 Male, age 75, right hemisphere 33.4
2517 Female, age 94, left hemisphere 32.9
1987 Female, age 91, left hemisphere 32.1
Basal amygdala
nTPM: 36.2
2243 Female, age 91, right hemisphere 38.2
2609 Male, age 75, right hemisphere 37.5
2827 Female, age 67, right hemisphere 37.5
2685 Female, age 94, left hemisphere 36.1
2110 Male, age 80, left hemisphere 34.5
1955 Male, age 76, both hemispheres 33.7
Central amygdala
nTPM: 33.9
2826 Female, age 94, left hemisphere 37.0
2239 Male, age 80, left hemisphere 34.8
1905 Male, age 76, both hemispheres 33.8
2515 Male, age 75, right hemisphere 33.3
2701 Female, age 91, right hemisphere 30.4
Corticomedial amygdala
nTPM: 35.9
2242 Female, age 91, right hemisphere 39.7
2829 Male, age 80, left hemisphere 38.3
2535 Female, age 67, right hemisphere 37.9
2240 Male, age 76, both hemispheres 34.3
2428 Male, age 75, right hemisphere 32.7
2429 Female, age 94, left hemisphere 32.3
Lateral amygdala
nTPM: 34.5
2534 Female, age 94, left hemisphere 36.6
2830 Female, age 67, right hemisphere 34.9
2516 Male, age 75, right hemisphere 34.7
2256 Male, age 80, left hemisphere 34.5
1883 Male, age 76, both hemispheres 33.9
2255 Female, age 91, right hemisphere 32.2
Stria terminalis, bed nucleus
nTPM: 31.3
2486 Female, age 94, both hemispheres 32.1
1974 Female, age 91, both hemispheres 31.7
2201 Male, age 74, unknown 30.2

AMYGDALA - GTEx RNA-seqi
Average nTPM 34.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 34.0
Samples: 152

Max nTPM: 47.1
Min nTPM: 23.9
Std nTPM: 4.8
Median nTPM: 33.6
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 47.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 44.7
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 44.1
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 44.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 43.9
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 43.8
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 43.2
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 43.2
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 43.0
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 42.9
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 42.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 55.1
FF:10151-102I7 76 years, female 55.1

AMYGDALA - Pig RNA-seqi
Average nTPM 25.6
Pig sample Sample description nTPM
Amygdala
nTPM: 25.6
Samples: 4

Max nTPM: 33.8
Min nTPM: 21.0
Sample A Female 33.8
Sample B Female 21.0
Sample C Male 22.6
Sample D Male 25.1

AMYGDALA - Mouse RNA-seqi
Average nTPM 63.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 63.9
Samples: 4

Max nTPM: 66.5
Min nTPM: 59.6
Sample A Male 59.6
Sample B Male 65.7
Sample C Female 66.5
Sample D Female 63.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 20.0
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 20.0
74988738 Antisense, RP_060315_04_B06, Mouse strain C57BL/6J (56 days, male) 20.2
70598364 Antisense, RP_050407_04_E11, Mouse strain C57BL/6J (56 days, male) 19.8

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.