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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:41.1 nTPM
HPA:41.1 nTPM
GTEx:34.2 nTPM
FANTOM5:83.7 Scaled Tags Per Million
Pig:12.5 nTPM
Mouse:34.0 nTPM
Allen mouse:3.1 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 41.1
Sample id Sample description nTPM
Amygdala
nTPM: 39.2
2814 Male, age 76, right hemisphere 41.7
2517 Female, age 94, left hemisphere 41.4
2514 Male, age 75, right hemisphere 39.8
2695 Female, age 67, right hemisphere 39.3
1987 Female, age 91, left hemisphere 34.0
Basal amygdala
nTPM: 37.2
2827 Female, age 67, right hemisphere 41.6
1955 Male, age 76, both hemispheres 37.6
2609 Male, age 75, right hemisphere 37.1
2110 Male, age 80, left hemisphere 36.7
2685 Female, age 94, left hemisphere 36.2
2243 Female, age 91, right hemisphere 33.8
Central amygdala
nTPM: 40.1
2826 Female, age 94, left hemisphere 46.3
1905 Male, age 76, both hemispheres 42.9
2701 Female, age 91, right hemisphere 38.2
2239 Male, age 80, left hemisphere 37.4
2515 Male, age 75, right hemisphere 35.6
Corticomedial amygdala
nTPM: 35.7
2240 Male, age 76, both hemispheres 40.9
2535 Female, age 67, right hemisphere 39.4
2429 Female, age 94, left hemisphere 37.3
2428 Male, age 75, right hemisphere 36.8
2829 Male, age 80, left hemisphere 31.3
2242 Female, age 91, right hemisphere 28.7
Lateral amygdala
nTPM: 41.1
2830 Female, age 67, right hemisphere 48.4
2534 Female, age 94, left hemisphere 41.7
1883 Male, age 76, both hemispheres 40.4
2516 Male, age 75, right hemisphere 40.3
2255 Female, age 91, right hemisphere 38.8
2256 Male, age 80, left hemisphere 36.8
Stria terminalis, bed nucleus
nTPM: 35.0
1974 Female, age 91, both hemispheres 35.7
2201 Male, age 74, unknown 35.7
2486 Female, age 94, both hemispheres 33.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 34.2
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 34.2
Samples: 152

Max nTPM: 71.4
Min nTPM: 18.2
Std nTPM: 11.4
Median nTPM: 31.3
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 71.4
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 67.6
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 64.0
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 63.9
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 57.2
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 56.9
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 56.7
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 56.3
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 56.2
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 55.4
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 55.0
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 83.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 83.7
FF:10151-102I7 76 years, female 83.7

AMYGDALA - Pig RNA-seqi
Average nTPM 12.5
Pig sample Sample description nTPM
Amygdala
nTPM: 12.5
Samples: 4

Max nTPM: 13.9
Min nTPM: 10.5
Sample A Female 13.9
Sample B Female 12.5
Sample C Male 13.2
Sample D Male 10.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 34.0
Mouse sample Sample description nTPM
Amygdala
nTPM: 34.0
Samples: 4

Max nTPM: 37.1
Min nTPM: 31.8
Sample A Male 31.8
Sample B Male 34.2
Sample C Female 37.1
Sample D Female 32.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 3.1
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 3.1
69015206 Antisense, RP_050310_02_E05, Mouse strain C57BL/6J (56 days, male) 3.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.