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CYTH1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:40.3 nTPM
HPA:40.3 nTPM
GTEx:40.9 nTPM
FANTOM5:89.3 Scaled Tags Per Million
Pig:16.0 nTPM
Mouse:43.8 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 40.3
Sample id Sample description nTPM
Hippocampus
nTPM: 35.2
2529 Female, age 94, left hemisphere 40.9
1911 Female, age 85, right hemisphere 36.2
2148 Female, age 91, left hemisphere 35.0
2621 Female, age 67, right hemisphere 33.7
1855 Male, age 76, left hemisphere 33.3
1898 Male, age 80, left hemisphere 32.2
Dentate gyrus
nTPM: 36.2
2530 Female, age 94, left hemisphere 42.4
2246 Female, age 85, both hemispheres 36.6
2531 Female, age 67, both hemispheres 36.3
2528 Male, age 74, both hemispheres 35.3
2010 Male, age 76, both hemispheres 35.0
1927 Female, age 91, both hemispheres 31.8
Entorhinal gyrus
nTPM: 37.0
2117 Female, age 91, right hemisphere 42.3
2764 Male, age 80, right hemisphere 38.0
2686 Male, age 75, right hemisphere 37.4
2613 Female, age 94, left hemisphere 36.0
1787 Male, age 76, left hemisphere 35.8
1938 Female, age 85, left hemisphere 32.4
Hippocampus, CA1
nTPM: 33.4
2527 Male, age 74, both hemispheres 36.1
2082 Female, age 91, right hemisphere 34.6
1873 Female, age 85, both hemispheres 34.2
2045 Male, age 76, both hemispheres 32.3
2749 Male, age 80, left hemisphere 29.8
Hippocampus, CA2
nTPM: 36.5
2437 Female, age 94, left hemisphere 40.4
1940 Female, age 85, left hemisphere 37.8
1963 Male, age 80, left hemisphere 37.1
2113 Female, age 91, right hemisphere 37.0
2249 Male, age 74, both hemispheres 34.5
1892 Male, age 76, both hemispheres 32.5
Hippocampus, CA3
nTPM: 34.9
1891 Female, age 85, both hemispheres 40.8
2620 Female, age 94, left hemisphere 37.1
1867 Male, age 76, both hemispheres 34.8
2436 Male, age 74, both hemispheres 33.3
2861 Female, age 67, both hemispheres 32.6
2137 Male, age 80, left hemisphere 30.9
Parahippocampal cortex
nTPM: 35.9
2532 Female, age 72, left hemisphere 39.6
2692 Male, age 74, both hemispheres 39.4
2018 Male, age 76, both hemispheres 38.9
1990 Female, age 91, right hemisphere 37.3
2693 Female, age 94, both hemispheres 36.1
1850 Male, age 80, both hemispheres 35.4
2245 Female, age 91, both hemispheres 34.2
1933 Female, age 85, both hemispheres 33.3
2622 Female, age 67, right hemisphere 33.3
2250 Female, age 67, right hemisphere 30.9
Perirhinal gyrus
nTPM: 33.2
2521 Female, age 94, right hemisphere 35.9
2848 Male, age 76, right hemisphere 34.5
1841 Female, age 85, right hemisphere 32.5
1794 Male, age 80, right hemisphere 31.9
1847 Female, age 91, left hemisphere 31.0
Subiculum
nTPM: 40.3
2042 Male, age 76, both hemispheres 47.7
2438 Female, age 94, left hemisphere 42.8
1977 Female, age 85, both hemispheres 39.6
1901 Male, age 80, both hemispheres 39.3
2619 Male, age 74, both hemispheres 37.3
2729 Female, age 91, right hemisphere 35.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.9
Samples: 197

Max nTPM: 128.0
Min nTPM: 18.7
Std nTPM: 17.0
Median nTPM: 36.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 128.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 118.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 105.6
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 85.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 78.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 75.0
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 75.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 74.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 73.0
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 72.6
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 72.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.3
FF:10169-103B7 60 years, female 91.0
FF:10153-102I9 76 years, female 87.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 21.6
Min nTPM: 12.1
Sample A Female 21.6
Sample B Female 14.5
Sample C Male 15.7
Sample D Male 12.1
Entorhinal cortex
nTPM: 12.2
Samples: 4

Max nTPM: 13.2
Min nTPM: 10.3
Sample A Female 13.2
Sample B Female 11.9
Sample C Male 13.2
Sample D Male 10.3
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 19.4
Min nTPM: 10.8
Sample A Female 19.4
Sample B Female 13.0
Sample C Male 12.0
Sample D Male 10.8
Ventral hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 16.6
Min nTPM: 10.2
Sample A Female 15.7
Sample B Female 10.2
Sample C Male 16.6
Sample D Male 15.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.4
Samples: 4

Max nTPM: 46.3
Min nTPM: 35.3
Sample A Male 36.5
Sample B Male 35.3
Sample C Female 46.3
Sample D Female 35.5
Hippocampal formation
nTPM: 43.8
Samples: 4

Max nTPM: 46.9
Min nTPM: 40.2
Sample A Male 40.2
Sample B Male 46.9
Sample C Female 46.6
Sample D Female 41.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
69015206 Antisense, RP_050310_02_E05, Mouse strain C57BL/6J (56 days, male) 5.2

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