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RCN2
AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		124.247
RNA expressioni
Consensus:42.5 nTPM
HPA:42.5 nTPM
GTEx:49.4 nTPM
FANTOM5:140.6 Scaled Tags Per Million
Pig:32.9 nTPM
Mouse:149.6 nTPM
Allen mouse:11.0 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA030694
Amygdala mean intensity 124.247
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 124.247
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 104.814
Cortical amygdala 120.563
Central amygdala 123.576
Medial amygdaloid nucleus 108.023

AMYGDALA - HPA Brain RNA-seq
Max nTPM 42.5
Sample id Sample description nTPM
Amygdala
nTPM: 41.0
2514 Male, age 75, right hemisphere 46.2
1987 Female, age 91, left hemisphere 42.7
2814 Male, age 76, right hemisphere 40.6
2517 Female, age 94, left hemisphere 40.4
2695 Female, age 67, right hemisphere 35.4
Basal amygdala
nTPM: 37.9
2609 Male, age 75, right hemisphere 45.2
1955 Male, age 76, both hemispheres 39.5
2243 Female, age 91, right hemisphere 39.0
2110 Male, age 80, left hemisphere 36.9
2685 Female, age 94, left hemisphere 35.7
2827 Female, age 67, right hemisphere 30.8
Central amygdala
nTPM: 40.6
2701 Female, age 91, right hemisphere 41.5
2239 Male, age 80, left hemisphere 41.1
1905 Male, age 76, both hemispheres 40.4
2515 Male, age 75, right hemisphere 40.0
2826 Female, age 94, left hemisphere 39.9
Corticomedial amygdala
nTPM: 39.6
2428 Male, age 75, right hemisphere 45.5
2829 Male, age 80, left hemisphere 40.3
2429 Female, age 94, left hemisphere 39.4
2242 Female, age 91, right hemisphere 39.2
2240 Male, age 76, both hemispheres 38.3
2535 Female, age 67, right hemisphere 34.8
Lateral amygdala
nTPM: 38.1
2516 Male, age 75, right hemisphere 42.6
1883 Male, age 76, both hemispheres 41.3
2534 Female, age 94, left hemisphere 40.1
2255 Female, age 91, right hemisphere 37.7
2256 Male, age 80, left hemisphere 36.8
2830 Female, age 67, right hemisphere 30.3
Stria terminalis, bed nucleus
nTPM: 42.5
1974 Female, age 91, both hemispheres 44.3
2486 Female, age 94, both hemispheres 41.7
2201 Male, age 74, unknown 41.6

AMYGDALA - GTEx RNA-seqi
Average nTPM 49.4
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 49.4
Samples: 152

Max nTPM: 99.3
Min nTPM: 19.7
Std nTPM: 12.4
Median nTPM: 48.5
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 99.3
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 91.0
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 80.3
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 79.3
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 77.6
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 77.1
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 73.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 72.5
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 68.3
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 67.9
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 67.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 140.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 140.6
FF:10151-102I7 76 years, female 140.6

AMYGDALA - Pig RNA-seqi
Average nTPM 32.9
Pig sample Sample description nTPM
Amygdala
nTPM: 32.9
Samples: 4

Max nTPM: 41.3
Min nTPM: 27.8
Sample A Female 41.3
Sample B Female 31.9
Sample C Male 27.8
Sample D Male 30.5

AMYGDALA - Mouse RNA-seqi
Average nTPM 149.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 149.6
Samples: 4

Max nTPM: 153.9
Min nTPM: 143.7
Sample A Male 153.9
Sample B Male 143.7
Sample C Female 148.2
Sample D Female 152.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 11.0
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 11.0
69816774 Antisense, RP_050510_01_H01, Mouse strain C57BL/6J (56 days, male) 13.2
73997151 Antisense, RP_051214_03_F10, Mouse strain C57BL/6J (56 days, male) 8.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.