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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:117.4 nTPM
HPA:117.4 nTPM
GTEx:95.5 nTPM
FANTOM5:67.2 Scaled Tags Per Million
Pig:62.7 nTPM
Mouse:190.2 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027337Antibody HPA031082Antibody CAB017460
Glial cells Not detectedNot detectedNot detected
Neuronal cells LowMediumHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 117.4
Sample id Sample description nTPM
Hippocampus
nTPM: 109.4
1898 Male, age 80, left hemisphere 121.3
2529 Female, age 94, left hemisphere 112.2
1855 Male, age 76, left hemisphere 109.2
2621 Female, age 67, right hemisphere 106.4
1911 Female, age 85, right hemisphere 105.2
2148 Female, age 91, left hemisphere 102.3
Dentate gyrus
nTPM: 110.0
2010 Male, age 76, both hemispheres 126.4
1927 Female, age 91, both hemispheres 113.5
2530 Female, age 94, left hemisphere 108.4
2246 Female, age 85, both hemispheres 107.3
2528 Male, age 74, both hemispheres 104.1
2531 Female, age 67, both hemispheres 100.0
Entorhinal gyrus
nTPM: 109.5
1938 Female, age 85, left hemisphere 116.3
2764 Male, age 80, right hemisphere 115.3
2686 Male, age 75, right hemisphere 109.2
2117 Female, age 91, right hemisphere 109.1
1787 Male, age 76, left hemisphere 108.3
2613 Female, age 94, left hemisphere 99.0
Hippocampus, CA1
nTPM: 117.4
2749 Male, age 80, left hemisphere 131.2
2045 Male, age 76, both hemispheres 129.0
1873 Female, age 85, both hemispheres 115.8
2082 Female, age 91, right hemisphere 105.6
2527 Male, age 74, both hemispheres 105.6
Hippocampus, CA2
nTPM: 113.8
1892 Male, age 76, both hemispheres 132.0
1963 Male, age 80, left hemisphere 121.6
2249 Male, age 74, both hemispheres 112.8
1940 Female, age 85, left hemisphere 106.7
2437 Female, age 94, left hemisphere 106.2
2113 Female, age 91, right hemisphere 103.6
Hippocampus, CA3
nTPM: 111.3
1867 Male, age 76, both hemispheres 127.0
2137 Male, age 80, left hemisphere 121.1
1891 Female, age 85, both hemispheres 109.4
2436 Male, age 74, both hemispheres 108.5
2620 Female, age 94, left hemisphere 107.3
2861 Female, age 67, both hemispheres 94.7
Parahippocampal cortex
nTPM: 109.2
1850 Male, age 80, both hemispheres 122.7
2018 Male, age 76, both hemispheres 118.8
1990 Female, age 91, right hemisphere 111.9
1933 Female, age 85, both hemispheres 111.3
2532 Female, age 72, left hemisphere 108.6
2250 Female, age 67, right hemisphere 107.7
2245 Female, age 91, both hemispheres 106.6
2692 Male, age 74, both hemispheres 105.0
2693 Female, age 94, both hemispheres 101.3
2622 Female, age 67, right hemisphere 98.3
Perirhinal gyrus
nTPM: 115.0
1847 Female, age 91, left hemisphere 120.9
1841 Female, age 85, right hemisphere 120.5
1794 Male, age 80, right hemisphere 116.5
2848 Male, age 76, right hemisphere 112.5
2521 Female, age 94, right hemisphere 104.7
Subiculum
nTPM: 110.0
2042 Male, age 76, both hemispheres 118.9
1901 Male, age 80, both hemispheres 114.8
1977 Female, age 85, both hemispheres 112.8
2438 Female, age 94, left hemisphere 108.8
2619 Male, age 74, both hemispheres 102.9
2729 Female, age 91, right hemisphere 102.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 95.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 95.5
Samples: 197

Max nTPM: 299.0
Min nTPM: 57.1
Std nTPM: 30.1
Median nTPM: 89.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 299.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 265.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 203.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 184.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 179.3
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 178.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 175.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 160.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 149.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 136.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 135.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.2
FF:10169-103B7 60 years, female 73.2
FF:10153-102I9 76 years, female 61.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 62.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 62.7
Samples: 4

Max nTPM: 82.7
Min nTPM: 49.3
Sample A Female 82.7
Sample B Female 63.6
Sample C Male 55.1
Sample D Male 49.3
Entorhinal cortex
nTPM: 46.4
Samples: 4

Max nTPM: 54.9
Min nTPM: 37.3
Sample A Female 54.9
Sample B Female 51.5
Sample C Male 42.0
Sample D Male 37.3
Subiculum
nTPM: 49.4
Samples: 4

Max nTPM: 62.0
Min nTPM: 44.3
Sample A Female 62.0
Sample B Female 44.3
Sample C Male 46.6
Sample D Male 44.6
Ventral hippocampus
nTPM: 54.6
Samples: 4

Max nTPM: 63.6
Min nTPM: 38.9
Sample A Female 63.6
Sample B Female 38.9
Sample C Male 56.0
Sample D Male 60.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 190.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 174.1
Samples: 4

Max nTPM: 184.5
Min nTPM: 160.5
Sample A Male 160.5
Sample B Male 169.8
Sample C Female 184.5
Sample D Female 181.7
Hippocampal formation
nTPM: 190.2
Samples: 4

Max nTPM: 209.2
Min nTPM: 181.4
Sample A Male 209.2
Sample B Male 185.3
Sample C Female 181.4
Sample D Female 184.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
68191552 Antisense, RP_041129_01_D07, Mouse strain C57BL/6J (56 days, male) 5.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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