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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:39.8 nTPM
HPA:39.8 nTPM
GTEx:34.9 nTPM
FANTOM5:34.4 Scaled Tags Per Million
Pig:21.6 nTPM
Mouse:3.2 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035894
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.8
Sample id Sample description nTPM
Hippocampus
nTPM: 37.5
1898 Male, age 80, left hemisphere 41.5
2148 Female, age 91, left hemisphere 38.6
2621 Female, age 67, right hemisphere 37.4
2529 Female, age 94, left hemisphere 37.1
1911 Female, age 85, right hemisphere 35.9
1855 Male, age 76, left hemisphere 34.7
Dentate gyrus
nTPM: 36.4
2530 Female, age 94, left hemisphere 39.2
1927 Female, age 91, both hemispheres 37.5
2528 Male, age 74, both hemispheres 36.2
2531 Female, age 67, both hemispheres 35.9
2010 Male, age 76, both hemispheres 35.8
2246 Female, age 85, both hemispheres 33.9
Entorhinal gyrus
nTPM: 39.5
1938 Female, age 85, left hemisphere 40.7
2764 Male, age 80, right hemisphere 40.3
1787 Male, age 76, left hemisphere 40.2
2117 Female, age 91, right hemisphere 39.9
2686 Male, age 75, right hemisphere 38.0
2613 Female, age 94, left hemisphere 37.7
Hippocampus, CA1
nTPM: 37.3
2749 Male, age 80, left hemisphere 39.1
1873 Female, age 85, both hemispheres 38.7
2527 Male, age 74, both hemispheres 38.3
2082 Female, age 91, right hemisphere 35.8
2045 Male, age 76, both hemispheres 34.6
Hippocampus, CA2
nTPM: 37.6
1892 Male, age 76, both hemispheres 41.0
1963 Male, age 80, left hemisphere 39.7
2249 Male, age 74, both hemispheres 37.4
1940 Female, age 85, left hemisphere 36.0
2437 Female, age 94, left hemisphere 36.0
2113 Female, age 91, right hemisphere 35.5
Hippocampus, CA3
nTPM: 37.3
2620 Female, age 94, left hemisphere 38.0
2861 Female, age 67, both hemispheres 38.0
1867 Male, age 76, both hemispheres 37.9
2436 Male, age 74, both hemispheres 37.3
1891 Female, age 85, both hemispheres 36.9
2137 Male, age 80, left hemisphere 35.8
Parahippocampal cortex
nTPM: 37.9
1933 Female, age 85, both hemispheres 41.0
1850 Male, age 80, both hemispheres 39.4
2245 Female, age 91, both hemispheres 38.4
2622 Female, age 67, right hemisphere 38.2
1990 Female, age 91, right hemisphere 38.1
2018 Male, age 76, both hemispheres 37.7
2250 Female, age 67, right hemisphere 37.4
2693 Female, age 94, both hemispheres 37.1
2532 Female, age 72, left hemisphere 36.0
2692 Male, age 74, both hemispheres 35.5
Perirhinal gyrus
nTPM: 39.8
1841 Female, age 85, right hemisphere 40.7
1847 Female, age 91, left hemisphere 40.5
2848 Male, age 76, right hemisphere 40.2
1794 Male, age 80, right hemisphere 39.1
2521 Female, age 94, right hemisphere 38.5
Subiculum
nTPM: 37.3
1977 Female, age 85, both hemispheres 39.0
2729 Female, age 91, right hemisphere 38.1
2619 Male, age 74, both hemispheres 37.9
2438 Female, age 94, left hemisphere 37.3
1901 Male, age 80, both hemispheres 36.3
2042 Male, age 76, both hemispheres 35.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.9
Samples: 197

Max nTPM: 69.5
Min nTPM: 19.9
Std nTPM: 7.2
Median nTPM: 33.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 69.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 59.2
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 53.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 51.6
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 49.3
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 49.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 49.2
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 47.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 47.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 46.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 46.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.4
FF:10153-102I9 76 years, female 40.6
FF:10169-103B7 60 years, female 28.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.6
Samples: 4

Max nTPM: 24.8
Min nTPM: 17.1
Sample A Female 24.8
Sample B Female 24.6
Sample C Male 17.1
Sample D Male 20.0
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 21.6
Min nTPM: 13.8
Sample A Female 13.8
Sample B Female 21.6
Sample C Male 16.9
Sample D Male 14.0
Subiculum
nTPM: 18.7
Samples: 4

Max nTPM: 21.9
Min nTPM: 16.3
Sample A Female 21.9
Sample B Female 20.1
Sample C Male 16.3
Sample D Male 16.3
Ventral hippocampus
nTPM: 20.8
Samples: 4

Max nTPM: 27.8
Min nTPM: 17.3
Sample A Female 17.3
Sample B Female 18.9
Sample C Male 19.0
Sample D Male 27.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.3
Samples: 4

Max nTPM: 4.2
Min nTPM: 2.6
Sample A Male 2.7
Sample B Male 4.2
Sample C Female 3.5
Sample D Female 2.6
Hippocampal formation
nTPM: 2.7
Samples: 4

Max nTPM: 3.9
Min nTPM: 1.9
Sample A Male 3.0
Sample B Male 2.1
Sample C Female 1.9
Sample D Female 3.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68633383 Antisense, RP_050125_02_G06, Mouse strain C57BL/6J (56 days, male) 0.3

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