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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:39.5 nTPM
HPA:39.5 nTPM
GTEx:28.3 nTPM
FANTOM5:53.6 Scaled Tags Per Million
Pig:31.2 nTPM
Mouse:31.4 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA020880
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.5
Sample id Sample description nTPM
Hippocampus
nTPM: 38.9
2621 Female, age 67, right hemisphere 40.0
1898 Male, age 80, left hemisphere 39.3
1911 Female, age 85, right hemisphere 38.8
2529 Female, age 94, left hemisphere 38.7
2148 Female, age 91, left hemisphere 38.4
1855 Male, age 76, left hemisphere 38.0
Dentate gyrus
nTPM: 38.1
2530 Female, age 94, left hemisphere 39.7
2010 Male, age 76, both hemispheres 39.2
2528 Male, age 74, both hemispheres 38.1
2246 Female, age 85, both hemispheres 37.6
1927 Female, age 91, both hemispheres 37.2
2531 Female, age 67, both hemispheres 37.2
Entorhinal gyrus
nTPM: 39.5
2117 Female, age 91, right hemisphere 41.2
2764 Male, age 80, right hemisphere 40.5
1787 Male, age 76, left hemisphere 39.6
1938 Female, age 85, left hemisphere 39.3
2613 Female, age 94, left hemisphere 39.0
2686 Male, age 75, right hemisphere 37.2
Hippocampus, CA1
nTPM: 38.5
2749 Male, age 80, left hemisphere 40.8
1873 Female, age 85, both hemispheres 38.7
2527 Male, age 74, both hemispheres 38.4
2082 Female, age 91, right hemisphere 38.0
2045 Male, age 76, both hemispheres 36.6
Hippocampus, CA2
nTPM: 38.7
1963 Male, age 80, left hemisphere 40.2
1892 Male, age 76, both hemispheres 39.0
2249 Male, age 74, both hemispheres 38.7
1940 Female, age 85, left hemisphere 38.4
2437 Female, age 94, left hemisphere 38.1
2113 Female, age 91, right hemisphere 37.7
Hippocampus, CA3
nTPM: 38.7
2137 Male, age 80, left hemisphere 41.2
1867 Male, age 76, both hemispheres 40.1
1891 Female, age 85, both hemispheres 39.2
2620 Female, age 94, left hemisphere 37.6
2436 Male, age 74, both hemispheres 37.3
2861 Female, age 67, both hemispheres 36.8
Parahippocampal cortex
nTPM: 38.3
2532 Female, age 72, left hemisphere 39.8
1990 Female, age 91, right hemisphere 39.1
1850 Male, age 80, both hemispheres 38.9
1933 Female, age 85, both hemispheres 38.8
2692 Male, age 74, both hemispheres 38.4
2018 Male, age 76, both hemispheres 38.2
2245 Female, age 91, both hemispheres 38.1
2693 Female, age 94, both hemispheres 37.5
2250 Female, age 67, right hemisphere 37.4
2622 Female, age 67, right hemisphere 36.6
Perirhinal gyrus
nTPM: 39.0
1794 Male, age 80, right hemisphere 39.7
1847 Female, age 91, left hemisphere 39.4
1841 Female, age 85, right hemisphere 39.1
2848 Male, age 76, right hemisphere 38.6
2521 Female, age 94, right hemisphere 38.5
Subiculum
nTPM: 39.1
1901 Male, age 80, both hemispheres 42.2
1977 Female, age 85, both hemispheres 40.4
2042 Male, age 76, both hemispheres 40.2
2619 Male, age 74, both hemispheres 39.4
2729 Female, age 91, right hemisphere 37.4
2438 Female, age 94, left hemisphere 35.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.3
Samples: 197

Max nTPM: 52.3
Min nTPM: 15.4
Std nTPM: 6.8
Median nTPM: 27.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 52.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 50.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 47.8
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 47.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 45.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 44.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 43.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 43.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 42.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 41.5
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 41.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.6
FF:10153-102I9 76 years, female 59.1
FF:10169-103B7 60 years, female 48.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 31.2
Samples: 4

Max nTPM: 37.2
Min nTPM: 25.8
Sample A Female 37.2
Sample B Female 30.0
Sample C Male 31.9
Sample D Male 25.8
Entorhinal cortex
nTPM: 26.5
Samples: 4

Max nTPM: 29.8
Min nTPM: 24.3
Sample A Female 29.8
Sample B Female 25.8
Sample C Male 24.3
Sample D Male 25.9
Subiculum
nTPM: 28.3
Samples: 4

Max nTPM: 33.0
Min nTPM: 26.6
Sample A Female 33.0
Sample B Female 26.7
Sample C Male 27.0
Sample D Male 26.6
Ventral hippocampus
nTPM: 29.8
Samples: 4

Max nTPM: 35.5
Min nTPM: 21.5
Sample A Female 30.6
Sample B Female 21.5
Sample C Male 35.5
Sample D Male 31.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 31.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.1
Samples: 4

Max nTPM: 31.1
Min nTPM: 25.2
Sample A Male 25.2
Sample B Male 26.1
Sample C Female 31.1
Sample D Female 26.0
Hippocampal formation
nTPM: 31.5
Samples: 4

Max nTPM: 34.6
Min nTPM: 28.2
Sample A Male 28.2
Sample B Male 30.2
Sample C Female 34.6
Sample D Female 32.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
68301353 Antisense, RP_041130_01_B02, Mouse strain C57BL/6J (56 days, male) 2.6

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The Human Protein Atlas

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