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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:320.1 nTPM
HPA:320.1 nTPM
GTEx:316.2 nTPM
FANTOM5:1080.8 Scaled Tags Per Million
Pig:503.2 nTPM
Mouse:650.5 nTPM
Allen mouse:26.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029292Antibody HPA071992
Glial cells LowHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 320.1
Sample id Sample description nTPM
Hippocampus
nTPM: 320.1
1898 Male, age 80, left hemisphere 395.0
1855 Male, age 76, left hemisphere 357.3
2621 Female, age 67, right hemisphere 321.4
1911 Female, age 85, right hemisphere 308.8
2529 Female, age 94, left hemisphere 278.4
2148 Female, age 91, left hemisphere 259.7
Dentate gyrus
nTPM: 298.0
2010 Male, age 76, both hemispheres 365.7
1927 Female, age 91, both hemispheres 337.0
2530 Female, age 94, left hemisphere 313.4
2246 Female, age 85, both hemispheres 292.3
2528 Male, age 74, both hemispheres 250.0
2531 Female, age 67, both hemispheres 229.7
Entorhinal gyrus
nTPM: 245.7
2117 Female, age 91, right hemisphere 285.1
1938 Female, age 85, left hemisphere 272.0
2764 Male, age 80, right hemisphere 250.3
1787 Male, age 76, left hemisphere 242.2
2613 Female, age 94, left hemisphere 216.3
2686 Male, age 75, right hemisphere 208.3
Hippocampus, CA1
nTPM: 320.1
2749 Male, age 80, left hemisphere 432.6
1873 Female, age 85, both hemispheres 389.5
2045 Male, age 76, both hemispheres 289.6
2527 Male, age 74, both hemispheres 287.9
2082 Female, age 91, right hemisphere 201.2
Hippocampus, CA2
nTPM: 306.8
1892 Male, age 76, both hemispheres 410.0
1963 Male, age 80, left hemisphere 385.7
1940 Female, age 85, left hemisphere 275.6
2249 Male, age 74, both hemispheres 270.1
2437 Female, age 94, left hemisphere 269.9
2113 Female, age 91, right hemisphere 229.8
Hippocampus, CA3
nTPM: 287.2
2137 Male, age 80, left hemisphere 305.9
2436 Male, age 74, both hemispheres 297.0
2620 Female, age 94, left hemisphere 290.3
1867 Male, age 76, both hemispheres 284.2
2861 Female, age 67, both hemispheres 278.2
1891 Female, age 85, both hemispheres 267.9
Parahippocampal cortex
nTPM: 244.1
2018 Male, age 76, both hemispheres 269.8
2245 Female, age 91, both hemispheres 266.7
1850 Male, age 80, both hemispheres 262.5
1933 Female, age 85, both hemispheres 254.8
1990 Female, age 91, right hemisphere 248.6
2250 Female, age 67, right hemisphere 247.5
2532 Female, age 72, left hemisphere 234.4
2692 Male, age 74, both hemispheres 222.0
2622 Female, age 67, right hemisphere 220.5
2693 Female, age 94, both hemispheres 214.5
Perirhinal gyrus
nTPM: 256.2
1841 Female, age 85, right hemisphere 278.0
1794 Male, age 80, right hemisphere 271.2
1847 Female, age 91, left hemisphere 252.8
2521 Female, age 94, right hemisphere 246.5
2848 Male, age 76, right hemisphere 232.4
Subiculum
nTPM: 266.9
2042 Male, age 76, both hemispheres 325.6
1901 Male, age 80, both hemispheres 300.0
2619 Male, age 74, both hemispheres 254.7
1977 Female, age 85, both hemispheres 246.4
2438 Female, age 94, left hemisphere 241.6
2729 Female, age 91, right hemisphere 233.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 316.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 316.2
Samples: 197

Max nTPM: 754.2
Min nTPM: 153.9
Std nTPM: 94.7
Median nTPM: 297.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 754.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 658.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 599.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 555.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 548.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 538.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 532.7
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 526.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 524.9
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 514.5
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 502.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1080.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1080.8
FF:10169-103B7 60 years, female 1248.3
FF:10153-102I9 76 years, female 913.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 503.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 503.2
Samples: 4

Max nTPM: 685.1
Min nTPM: 410.0
Sample A Female 685.1
Sample B Female 485.2
Sample C Male 432.5
Sample D Male 410.0
Entorhinal cortex
nTPM: 344.2
Samples: 4

Max nTPM: 415.0
Min nTPM: 253.5
Sample A Female 361.5
Sample B Female 415.0
Sample C Male 346.8
Sample D Male 253.5
Subiculum
nTPM: 336.7
Samples: 4

Max nTPM: 426.9
Min nTPM: 270.3
Sample A Female 426.9
Sample B Female 325.0
Sample C Male 270.3
Sample D Male 324.7
Ventral hippocampus
nTPM: 390.2
Samples: 4

Max nTPM: 464.9
Min nTPM: 300.6
Sample A Female 464.9
Sample B Female 300.6
Sample C Male 401.7
Sample D Male 393.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 650.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 573.9
Samples: 4

Max nTPM: 584.2
Min nTPM: 567.0
Sample A Male 567.0
Sample B Male 568.4
Sample C Female 584.2
Sample D Female 575.8
Hippocampal formation
nTPM: 650.5
Samples: 4

Max nTPM: 670.9
Min nTPM: 620.1
Sample A Male 665.4
Sample B Male 645.7
Sample C Female 670.9
Sample D Female 620.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 26.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 26.9
532581 Antisense, RP_040810_02_C03, Mouse strain C57BL/6J (56 days, male) 26.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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