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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:35.6 nTPM
HPA:35.6 nTPM
GTEx:61.5 nTPM
FANTOM5:74.7 Scaled Tags Per Million
Pig:22.7 nTPM
Mouse:106.1 nTPM
Allen mouse:13.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030047
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.6
Sample id Sample description nTPM
Hippocampus
nTPM: 34.3
1898 Male, age 80, left hemisphere 43.9
1911 Female, age 85, right hemisphere 37.5
2529 Female, age 94, left hemisphere 35.7
2621 Female, age 67, right hemisphere 31.5
1855 Male, age 76, left hemisphere 29.0
2148 Female, age 91, left hemisphere 28.2
Dentate gyrus
nTPM: 30.3
2528 Male, age 74, both hemispheres 36.1
2530 Female, age 94, left hemisphere 35.5
2010 Male, age 76, both hemispheres 33.7
2246 Female, age 85, both hemispheres 30.5
2531 Female, age 67, both hemispheres 23.0
1927 Female, age 91, both hemispheres 22.9
Entorhinal gyrus
nTPM: 32.7
2764 Male, age 80, right hemisphere 41.9
1938 Female, age 85, left hemisphere 38.3
2117 Female, age 91, right hemisphere 35.5
1787 Male, age 76, left hemisphere 33.6
2613 Female, age 94, left hemisphere 26.8
2686 Male, age 75, right hemisphere 20.2
Hippocampus, CA1
nTPM: 35.6
2749 Male, age 80, left hemisphere 49.5
2527 Male, age 74, both hemispheres 39.3
1873 Female, age 85, both hemispheres 33.5
2082 Female, age 91, right hemisphere 33.4
2045 Male, age 76, both hemispheres 22.0
Hippocampus, CA2
nTPM: 33.4
2249 Male, age 74, both hemispheres 44.4
1963 Male, age 80, left hemisphere 38.6
2113 Female, age 91, right hemisphere 34.2
1940 Female, age 85, left hemisphere 30.6
2437 Female, age 94, left hemisphere 28.0
1892 Male, age 76, both hemispheres 24.7
Hippocampus, CA3
nTPM: 33.7
2137 Male, age 80, left hemisphere 42.5
2436 Male, age 74, both hemispheres 40.1
2620 Female, age 94, left hemisphere 31.5
1867 Male, age 76, both hemispheres 31.0
1891 Female, age 85, both hemispheres 30.1
2861 Female, age 67, both hemispheres 27.0
Parahippocampal cortex
nTPM: 29.1
1933 Female, age 85, both hemispheres 35.8
2018 Male, age 76, both hemispheres 34.8
2250 Female, age 67, right hemisphere 33.0
1850 Male, age 80, both hemispheres 32.2
2245 Female, age 91, both hemispheres 31.3
2532 Female, age 72, left hemisphere 27.0
1990 Female, age 91, right hemisphere 24.7
2622 Female, age 67, right hemisphere 24.7
2692 Male, age 74, both hemispheres 24.2
2693 Female, age 94, both hemispheres 23.2
Perirhinal gyrus
nTPM: 32.5
1794 Male, age 80, right hemisphere 36.3
2521 Female, age 94, right hemisphere 35.8
1841 Female, age 85, right hemisphere 34.2
1847 Female, age 91, left hemisphere 28.9
2848 Male, age 76, right hemisphere 27.4
Subiculum
nTPM: 30.6
1977 Female, age 85, both hemispheres 40.1
1901 Male, age 80, both hemispheres 36.3
2042 Male, age 76, both hemispheres 32.2
2619 Male, age 74, both hemispheres 31.3
2729 Female, age 91, right hemisphere 27.0
2438 Female, age 94, left hemisphere 16.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 61.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 61.5
Samples: 197

Max nTPM: 114.9
Min nTPM: 16.5
Std nTPM: 20.8
Median nTPM: 58.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 114.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 113.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 113.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 113.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 112.0
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 109.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 109.2
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 106.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 105.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 102.0
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 101.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.7
FF:10153-102I9 76 years, female 81.5
FF:10169-103B7 60 years, female 68.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 22.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 22.7
Samples: 4

Max nTPM: 28.2
Min nTPM: 14.3
Sample A Female 28.2
Sample B Female 21.5
Sample C Male 26.8
Sample D Male 14.3
Entorhinal cortex
nTPM: 17.7
Samples: 4

Max nTPM: 20.7
Min nTPM: 14.0
Sample A Female 20.2
Sample B Female 16.0
Sample C Male 20.7
Sample D Male 14.0
Subiculum
nTPM: 22.0
Samples: 4

Max nTPM: 29.8
Min nTPM: 17.2
Sample A Female 29.8
Sample B Female 20.6
Sample C Male 20.4
Sample D Male 17.2
Ventral hippocampus
nTPM: 20.9
Samples: 4

Max nTPM: 26.5
Min nTPM: 16.1
Sample A Female 20.0
Sample B Female 16.1
Sample C Male 26.5
Sample D Male 21.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 106.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 68.3
Samples: 4

Max nTPM: 71.1
Min nTPM: 65.7
Sample A Male 68.3
Sample B Male 65.7
Sample C Female 68.2
Sample D Female 71.1
Hippocampal formation
nTPM: 106.1
Samples: 4

Max nTPM: 119.3
Min nTPM: 85.4
Sample A Male 85.4
Sample B Male 117.3
Sample C Female 119.3
Sample D Female 102.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.6
68341860 Antisense, RP_041207_02_C12, Mouse strain C57BL/6J (56 days, male) 18.4
795 Antisense, RP_Baylor_102958, Mouse strain C57BL/6J (56 days, male) 8.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
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