Brain tissue expression of HDGF in retina

RETINA - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

Consensus:	68.9	nTPM
GTEx:	68.9	nTPM
FANTOM5:	53.7	Scaled Tags Per Million

Pig:	42.3	nTPM
Mouse:	121.5	nTPM

RETINA - GTEx RNA-seqⁱ

Average nTPM	68.9

GTEx sample id

Sample description

nTPM

Retina
Average nTPM: 68.9

Samples: 105

Max nTPM: 100.8
Min nTPM: 46.0
Std nTPM: 10.1
Median nTPM: 0.0

137_1	83 years, male	100.8
237_1	82 years, male	92.7
375_1	74 years, female	92.7
322_1	76 years, male	91.6
41_1	94 years, female	91.1
35_1	74 years, female	91.0
42_1	85 years, male	90.5
218_1	71 years, female	87.4
347_1	72 years, male	85.4
17_1	71 years, male	84.5
173_1	67 years, male	83.2
264_1	73 years, female	82.9
379_1	60 years, male	82.8
315_1	62 years, female	82.0
266_1	85 years, male	80.3
377_1	82 years, female	79.0
246_1	77 years, male	78.4
452_1	88 years, female	78.4
447_1	81 years, male	78.0
518_1	75 years, female	77.2
386_1	76 years, male	76.7
394_1	75 years, female	76.2
319_1	81 years, male	74.8
313_1	79 years, female	74.3
376_1	75 years, female	73.7
384_1	83 years, male	73.6
229_1	69 years, female	73.3
99_1	64 years, male	73.0
406_1	79 years, male	73.0
2_1	77 years, female	72.8
295_1	61 years, female	72.8
189_1	76 years, male	72.7
316_1	62 years, male	72.7
265_1	87 years, male	72.4
120_1	70 years, female	72.3
307_1	66 years, female	71.1
404_1	82 years, female	71.1
6_1	73 years, female	70.4
355_1	70 years, female	70.4
109_1	81 years, female	70.1
335_1	73 years, female	70.1
351_1	91 years, male	69.9
405_1	91 years, male	69.7
495_1	57 years, female	69.4
506_1	65 years, male	68.9
126_1	63 years, male	68.7
254_1	77 years, female	68.4
288_1	66 years, female	68.0
117_1	61 years, male	67.7
317_1	60 years, male	67.4
251_1	78 years, male	67.3
139_1	64 years, female	67.0
142_1	61 years, female	67.0
217_1	76 years, male	66.8
320_1	89 years, female	66.8
425_1	59 years, female	66.8
4_1	88 years, female	66.6
308_1	70 years, female	66.5
413_1	59 years, female	66.5
145_1	84 years, male	66.3
243_1	75 years, male	66.1
318_1	68 years, male	65.9
311_1	78 years, male	65.7
324_1	76 years, male	65.4
163_1	78 years, male	65.0
354_1	81 years, female	64.9
501_1	88 years, male	64.9
480_1	63 years, male	63.8
526_1	61 years, male	63.8
389_1	86 years, female	63.5
499_1	55 years, female	63.1
162_1	79 years, female	62.9
396_1	62 years, male	62.9
18_1	88 years, male	62.8
414_1	84 years, female	62.8
292_1	71 years, male	62.6
503_1	68 years, male	62.2
352_1	62 years, male	61.7
468_1	89 years, male	61.7
81_1	67 years, male	61.5
348_1	84 years, male	61.4
415_1	77 years, female	61.3
321_1	62 years, female	61.2
177_1	74 years, male	60.8
293_1	68 years, female	60.8
490_1	67 years, female	60.7
153_1	70 years, female	60.3
350_1	84 years, female	59.9
356_1	87 years, female	59.8
286_1	68 years, female	59.2
119_1	70 years, female	59.1
172_1	72 years, female	58.6
115_1	83 years, male	58.5
517_1	88 years, male	58.1
314_1	67 years, male	58.0
43_1	64 years, female	57.7
466_1	57 years, female	57.2
89_1	63 years, male	55.6
349_1	83 years, male	55.4
353_1	82 years, female	55.3
491_1	89 years, female	55.3
291_1	76 years, male	55.2
9_1	66 years, female	53.0
32_1	67 years, male	50.3
149_1	88 years, male	46.0
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RETINA - FANTOM5 CAGEⁱ

Max Scaled Tags Per Million	53.7

FANTOM5 sample id

Sample description

Scaled Tags Per Million

Retina
Scaled Tags Per Million: 53.7

FF:10030-101E3

24-65 years, mixed

53.7

RETINA - Pig RNA-seqⁱ

Average nTPM	42.3

Pig sample

Sample description

nTPM

Retina
nTPM: 42.3

Samples: 4

Max nTPM: 48.5
Min nTPM: 38.5

Sample A	Female	39.8
Sample B	Female	42.5
Sample C	Male	48.5
Sample D	Male	38.5

RETINA - Mouse RNA-seqⁱ

Average nTPM	121.5

Mouse sample

Sample description

nTPM

Retina
nTPM: 121.5

Samples: 4

Max nTPM: 128.2
Min nTPM: 111.9

Sample A	Male	111.9
Sample B	Male	119.1
Sample C	Female	126.6
Sample D	Female	128.2