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PARP1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:39.7 nTPM
HPA:39.7 nTPM
GTEx:58.2 nTPM
FANTOM5:166.2 Scaled Tags Per Million
Pig:32.5 nTPM
Mouse:21.8 nTPM
Allen mouse:1.2 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 39.7
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 33.5
2019 Male, age 18, unknown 45.5
1870 Female, age 42, unknown 38.4
2411 Female, age 72, unknown 37.7
1830 Male, age 51, unknown 34.0
1833 Male, age 53, unknown 32.9
2828 Female, age 72, unknown 32.9
2219 Male, age 76, both hemispheres 31.8
1827 Male, age 72, unknown 29.3
2586 Male, age 75, left hemisphere 26.4
2666 Male, age 74, left hemisphere 26.4
Dorsal raphe nucleus
nTPM: 33.6
2750 Male, age 76, both hemispheres 43.1
1828 Male, age 53, unknown 34.4
2298 Female, age 72, unknown 31.8
2047 Male, age 72, unknown 29.8
2016 Female, age 72, unknown 29.1
Inferior colliculus
nTPM: 29.8
2097 Female, age 72, unknown 31.1
1890 Male, age 53, unknown 30.8
1848 Female, age 42, unknown 29.7
2849 Male, age 72, unknown 27.5
Median raphe nucleus
nTPM: 32.5
2220 Male, age 76, midline 32.5
Pedunculopontine tegmental nucleus
nTPM: 35.8
2338 Male, age 61, both hemispheres 37.2
2334 Male, age 80, both hemispheres 36.3
1921 Female, age 85, both hemispheres 34.0
Periaquaductal grey, anterior
nTPM: 29.8
2502 Female, age 75, unknown 31.6
1947 Male, age 18, unknown 30.6
1795 Male, age 51, unknown 27.3
Periaquaductal grey, dorsal
nTPM: 26.0
2464 Female, age 72, unknown 30.0
1831 Male, age 72, unknown 26.0
2850 Male, age 76, both hemispheres 25.0
1840 Male, age 53, unknown 23.0
Periaquaductal grey, lateral
nTPM: 24.4
2272 Male, age 74, both hemispheres 27.0
2053 Male, age 18, unknown 24.2
2140 Male, age 76, both hemispheres 22.0
Pretectal area
nTPM: 32.4
1817 Female, age 42, unknown 39.0
2007 Male, age 72, unknown 37.2
2667 Female, age 75, unknown 36.8
1815 Male, age 53, unknown 35.9
1944 Female, age 72, unknown 35.0
1816 Male, age 51, unknown 33.8
2273 Male, age 74, both hemispheres 30.4
2316 Male, age 76, right hemisphere 28.0
2407 Male, age 75, both hemispheres 27.7
2224 Female, age 72, unknown 27.2
2825 Male, age 18, unknown 25.0
Red nucleus
nTPM: 39.7
1821 Female, age 72, unknown 44.5
1865 Male, age 51, unknown 43.0
1904 Male, age 53, unknown 42.7
2785 Male, age 18, unknown 42.4
2503 Female, age 72, unknown 42.2
1954 Female, age 42, unknown 41.2
2823 Male, age 76, right hemisphere 41.0
2227 Male, age 72, unknown 40.0
2769 Male, age 72, unknown 39.7
2725 Female, age 75, unknown 36.5
2588 Male, age 74, left hemisphere 34.1
2584 Male, age 75, left hemisphere 29.1
Substantia nigra
nTPM: 32.2
1889 Female, age 72, unknown 37.9
1916 Female, age 42, unknown 36.1
1851 Male, age 51, unknown 35.4
1941 Male, age 53, unknown 32.3
2409 Female, age 72, unknown 32.2
2583 Male, age 75, right hemisphere 31.1
2241 Male, age 72, unknown 31.0
2590 Female, age 75, unknown 29.8
2699 Male, age 18, unknown 28.4
2665 Male, age 74, both hemispheres 28.2
Superior colliculus
nTPM: 31.1
1913 Female, age 42, unknown 38.4
1995 Male, age 72, unknown 36.5
2587 Male, age 74, left hemisphere 33.7
2087 Female, age 72, unknown 31.6
1796 Male, age 53, unknown 30.3
1895 Male, age 76, right hemisphere 30.3
2261 Male, age 18, unknown 29.8
2668 Female, age 75, unknown 29.3
1839 Male, age 51, unknown 28.7
2664 Male, age 75, both hemispheres 22.6
Ventral tegmental area
nTPM: 34.1
2223 Female, age 72, unknown 41.3
2410 Female, age 72, unknown 36.7
2218 Male, age 76, both hemispheres 33.9
1915 Female, age 42, unknown 32.7
1942 Male, age 51, unknown 30.4
2021 Male, age 53, unknown 29.7

MIDBRAIN - GTEx RNA-seqi
Average nTPM 58.2
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 58.2
Samples: 139

Max nTPM: 107.4
Min nTPM: 39.5
Std nTPM: 13.0
Median nTPM: 54.6
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 107.4
GTEX-NPJ7-0011-R2a-SM-2I3GF 60-69 years, female 106.2
GTEX-X4XX-0011-R2A-SM-3P623 60-69 years, male 103.3
GTEX-Q2AG-0011-R2A-SM-2HMIT 40-49 years, female 96.7
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 96.7
GTEX-N7MT-0011-R2a-SM-2I3GI 60-69 years, female 93.6
GTEX-ZAB4-0011-R2a-SM-4RGNP 40-49 years, male 91.5
GTEX-1B8SG-0011-R2b-SM-79OOT 50-59 years, male 78.3
GTEX-1GTWX-0011-R2b-SM-ADEH5 60-69 years, male 77.7
GTEX-1H3O1-0011-R2b-SM-CKZOT 60-69 years, male 76.8
GTEX-1GZ2Q-0011-R2b-SM-9OSWO 40-49 years, male 76.0
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 166.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 166.2
FF:10158-103A5 76 years, female 166.2

MIDBRAIN - Pig RNA-seqi
Average nTPM 32.5
Pig sample Sample description nTPM
Midbrain
nTPM: 32.5
Samples: 4

Max nTPM: 41.8
Min nTPM: 24.6
Sample A Female 41.8
Sample B Female 27.5
Sample C Male 36.0
Sample D Male 24.6
Periaqueductal gray
nTPM: 26.4
Samples: 3

Max nTPM: 28.0
Min nTPM: 23.1
Sample B Female 28.0
Sample C Male 28.0
Sample D Male 23.1
Substantia nigra
nTPM: 30.0
Samples: 4

Max nTPM: 33.9
Min nTPM: 24.2
Sample A Female 30.6
Sample B Female 24.2
Sample C Male 31.1
Sample D Male 33.9
Superior colliculi
nTPM: 31.3
Samples: 4

Max nTPM: 38.3
Min nTPM: 23.8
Sample A Female 31.5
Sample B Female 23.8
Sample C Male 38.3
Sample D Male 31.5

MIDBRAIN - Mouse RNA-seqi
Average nTPM 21.8
Mouse sample Sample description nTPM
Midbrain
nTPM: 21.8
Samples: 4

Max nTPM: 22.6
Min nTPM: 21.1
Sample A Male 22.3
Sample B Male 21.1
Sample C Female 22.6
Sample D Female 21.2

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 1.2
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 1.2
70429154 Antisense, RP_050614_01_B02, Mouse strain C57BL/6J (56 days, male) 1.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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