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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		149.237
RNA expressioni
Consensus:29.5 nTPM
HPA:29.5 nTPM
GTEx:39.1 nTPM
FANTOM5:285.6 Scaled Tags Per Million
Pig:94.3 nTPM
Mouse:133.4 nTPM
Allen mouse:8.6 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA021307
Amygdala mean intensity 149.237
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract -
Basal medial amygdaloid nucleus 131.927
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 71.905
Cortical amygdala 136.239
Central amygdala 59.124
Medial amygdaloid nucleus 149.237

AMYGDALA - HPA Brain RNA-seq
Max nTPM 29.5
Sample id Sample description nTPM
Amygdala
nTPM: 0.3
2514 Male, age 75, right hemisphere 1.8
1987 Female, age 91, left hemisphere 0.0
2517 Female, age 94, left hemisphere 0.0
2695 Female, age 67, right hemisphere 0.0
2814 Male, age 76, right hemisphere 0.0
Basal amygdala
nTPM: 16.8
2243 Female, age 91, right hemisphere 41.8
2685 Female, age 94, left hemisphere 35.4
2110 Male, age 80, left hemisphere 18.9
1955 Male, age 76, both hemispheres 4.4
2827 Female, age 67, right hemisphere 0.2
2609 Male, age 75, right hemisphere 0.0
Central amygdala
nTPM: 5.7
2239 Male, age 80, left hemisphere 28.7
1905 Male, age 76, both hemispheres 0.0
2515 Male, age 75, right hemisphere 0.0
2701 Female, age 91, right hemisphere 0.0
2826 Female, age 94, left hemisphere 0.0
Corticomedial amygdala
nTPM: 21.4
2242 Female, age 91, right hemisphere 44.6
2829 Male, age 80, left hemisphere 37.4
2429 Female, age 94, left hemisphere 26.7
2240 Male, age 76, both hemispheres 13.6
2535 Female, age 67, right hemisphere 6.2
2428 Male, age 75, right hemisphere 0.0
Lateral amygdala
nTPM: 2.3
2255 Female, age 91, right hemisphere 5.7
2516 Male, age 75, right hemisphere 4.7
2534 Female, age 94, left hemisphere 2.1
2830 Female, age 67, right hemisphere 1.2
2256 Male, age 80, left hemisphere 0.5
1883 Male, age 76, both hemispheres 0.0
Stria terminalis, bed nucleus
nTPM: 29.5
2486 Female, age 94, both hemispheres 48.1
1974 Female, age 91, both hemispheres 34.2
2201 Male, age 74, unknown 6.2

AMYGDALA - GTEx RNA-seqi
Average nTPM 39.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 39.1
Samples: 152

Max nTPM: 88.0
Min nTPM: 3.3
Std nTPM: 16.0
Median nTPM: 38.7
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 88.0
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 78.8
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 77.1
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 75.4
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 73.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 69.5
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 66.8
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 65.6
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 63.2
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 62.9
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 62.7
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 285.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 285.6
FF:10151-102I7 76 years, female 285.6

AMYGDALA - Pig RNA-seqi
Average nTPM 94.3
Pig sample Sample description nTPM
Amygdala
nTPM: 94.3
Samples: 4

Max nTPM: 97.0
Min nTPM: 88.0
Sample A Female 97.0
Sample B Female 96.2
Sample C Male 96.0
Sample D Male 88.0

AMYGDALA - Mouse RNA-seqi
Average nTPM 133.4
Mouse sample Sample description nTPM
Amygdala
nTPM: 133.4
Samples: 4

Max nTPM: 151.1
Min nTPM: 119.3
Sample A Male 119.3
Sample B Male 133.4
Sample C Female 151.1
Sample D Female 129.7

AMYGDALA - Allen Mouse ISHi
Max Expression energy 8.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 8.6
70238884 Antisense, RP_050526_04_C08, Mouse strain C57BL/6J (56 days, male) 9.0
73817444 Antisense, RP_051101_01_B08, Mouse strain C57BL/6J (56 days, male) 8.1

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.