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COA6
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:38.2 nTPM
HPA:38.2 nTPM
GTEx:49.1 nTPM
FANTOM5:30.5 Scaled Tags Per Million
Pig:4.3 nTPM
Mouse:30.6 nTPM
Allen mouse:0.0 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 38.2
Sample id Sample description nTPM
Amygdala
nTPM: 35.4
1987 Female, age 91, left hemisphere 37.5
2517 Female, age 94, left hemisphere 36.2
2514 Male, age 75, right hemisphere 35.0
2814 Male, age 76, right hemisphere 34.4
2695 Female, age 67, right hemisphere 33.7
Basal amygdala
nTPM: 36.5
2110 Male, age 80, left hemisphere 37.7
2243 Female, age 91, right hemisphere 37.3
1955 Male, age 76, both hemispheres 37.0
2685 Female, age 94, left hemisphere 36.3
2827 Female, age 67, right hemisphere 36.1
2609 Male, age 75, right hemisphere 34.3
Central amygdala
nTPM: 35.5
2826 Female, age 94, left hemisphere 37.9
2239 Male, age 80, left hemisphere 36.0
1905 Male, age 76, both hemispheres 35.1
2701 Female, age 91, right hemisphere 34.4
2515 Male, age 75, right hemisphere 34.3
Corticomedial amygdala
nTPM: 36.7
2829 Male, age 80, left hemisphere 39.3
2429 Female, age 94, left hemisphere 37.4
2242 Female, age 91, right hemisphere 37.1
2428 Male, age 75, right hemisphere 35.7
2240 Male, age 76, both hemispheres 35.5
2535 Female, age 67, right hemisphere 35.4
Lateral amygdala
nTPM: 35.9
2534 Female, age 94, left hemisphere 38.6
2256 Male, age 80, left hemisphere 37.5
1883 Male, age 76, both hemispheres 36.3
2516 Male, age 75, right hemisphere 35.4
2255 Female, age 91, right hemisphere 34.2
2830 Female, age 67, right hemisphere 33.1
Stria terminalis, bed nucleus
nTPM: 38.2
1974 Female, age 91, both hemispheres 40.2
2486 Female, age 94, both hemispheres 39.3
2201 Male, age 74, unknown 35.0

AMYGDALA - GTEx RNA-seqi
Average nTPM 49.1
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 49.1
Samples: 152

Max nTPM: 167.9
Min nTPM: 20.0
Std nTPM: 24.1
Median nTPM: 41.9
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 167.9
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 165.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 144.5
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 123.3
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 91.6
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 90.5
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 89.8
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 88.5
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 85.1
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 84.8
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 84.5
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 30.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 30.5
FF:10151-102I7 76 years, female 30.5

AMYGDALA - Pig RNA-seqi
Average nTPM 4.3
Pig sample Sample description nTPM
Amygdala
nTPM: 4.3
Samples: 4

Max nTPM: 6.0
Min nTPM: 3.6
Sample A Female 6.0
Sample B Female 3.6
Sample C Male 3.8
Sample D Male 3.9

AMYGDALA - Mouse RNA-seqi
Average nTPM 30.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 30.6
Samples: 4

Max nTPM: 37.1
Min nTPM: 26.3
Sample A Male 30.0
Sample B Male 26.3
Sample C Female 37.1
Sample D Female 29.1

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.0
70474887 Antisense, RP_050623_01_C06, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.