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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:63.6 nTPM
HPA:63.6 nTPM
GTEx:86.0 nTPM
FANTOM5:37.9 Scaled Tags Per Million
Pig:61.5 nTPM
Mouse:35.9 nTPM
Allen mouse:16.3 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 63.6
Sample id Sample description nTPM
Amygdala
nTPM: 63.6
2814 Male, age 76, right hemisphere 66.2
2695 Female, age 67, right hemisphere 65.4
2514 Male, age 75, right hemisphere 63.1
2517 Female, age 94, left hemisphere 61.7
1987 Female, age 91, left hemisphere 61.5
Basal amygdala
nTPM: 62.3
2609 Male, age 75, right hemisphere 67.5
2110 Male, age 80, left hemisphere 62.6
2827 Female, age 67, right hemisphere 62.0
2685 Female, age 94, left hemisphere 60.8
2243 Female, age 91, right hemisphere 60.6
1955 Male, age 76, both hemispheres 60.3
Central amygdala
nTPM: 63.2
2826 Female, age 94, left hemisphere 67.2
2515 Male, age 75, right hemisphere 66.3
1905 Male, age 76, both hemispheres 64.7
2239 Male, age 80, left hemisphere 59.4
2701 Female, age 91, right hemisphere 58.7
Corticomedial amygdala
nTPM: 61.3
2428 Male, age 75, right hemisphere 65.3
2829 Male, age 80, left hemisphere 64.3
2429 Female, age 94, left hemisphere 60.4
2242 Female, age 91, right hemisphere 59.7
2240 Male, age 76, both hemispheres 59.5
2535 Female, age 67, right hemisphere 58.7
Lateral amygdala
nTPM: 62.5
2534 Female, age 94, left hemisphere 65.8
1883 Male, age 76, both hemispheres 64.3
2516 Male, age 75, right hemisphere 64.1
2830 Female, age 67, right hemisphere 60.8
2256 Male, age 80, left hemisphere 60.5
2255 Female, age 91, right hemisphere 59.2
Stria terminalis, bed nucleus
nTPM: 61.8
1974 Female, age 91, both hemispheres 63.7
2486 Female, age 94, both hemispheres 62.9
2201 Male, age 74, unknown 58.8

AMYGDALA - GTEx RNA-seqi
Average nTPM 86.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 86.0
Samples: 152

Max nTPM: 188.8
Min nTPM: 43.1
Std nTPM: 20.2
Median nTPM: 82.6
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 188.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 154.3
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 144.4
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 139.9
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 136.3
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 133.4
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 127.8
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 124.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 123.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 119.1
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 116.8
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 37.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 37.9
FF:10151-102I7 76 years, female 37.9

AMYGDALA - Pig RNA-seqi
Average nTPM 61.5
Pig sample Sample description nTPM
Amygdala
nTPM: 61.5
Samples: 4

Max nTPM: 80.6
Min nTPM: 53.9
Sample A Female 80.6
Sample B Female 56.6
Sample C Male 53.9
Sample D Male 55.0

AMYGDALA - Mouse RNA-seqi
Average nTPM 35.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 35.9
Samples: 4

Max nTPM: 38.9
Min nTPM: 34.3
Sample A Male 34.3
Sample B Male 35.5
Sample C Female 38.9
Sample D Female 34.8

AMYGDALA - Allen Mouse ISHi
Max Expression energy 16.3
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 16.3
81600090 Antisense, RP_080108_02_D06, Mouse strain C57BL/6J (56 days, male) 19.8
68441460 Antisense, RP_041214_02_D05, Mouse strain C57BL/6J (56 days, male) 12.8

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.