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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:59.5 nTPM
HPA:59.5 nTPM
GTEx:64.1 nTPM
FANTOM5:100.8 Scaled Tags Per Million
Pig:28.2 nTPM
Mouse:38.4 nTPM
Allen mouse:9.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023299
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.5
Sample id Sample description nTPM
Hippocampus
nTPM: 58.1
1855 Male, age 76, left hemisphere 58.7
2529 Female, age 94, left hemisphere 58.6
2621 Female, age 67, right hemisphere 58.5
1911 Female, age 85, right hemisphere 58.0
2148 Female, age 91, left hemisphere 57.6
1898 Male, age 80, left hemisphere 57.2
Dentate gyrus
nTPM: 57.7
2528 Male, age 74, both hemispheres 62.7
2010 Male, age 76, both hemispheres 61.1
1927 Female, age 91, both hemispheres 58.0
2246 Female, age 85, both hemispheres 56.2
2531 Female, age 67, both hemispheres 55.4
2530 Female, age 94, left hemisphere 53.0
Entorhinal gyrus
nTPM: 56.0
2117 Female, age 91, right hemisphere 59.9
1787 Male, age 76, left hemisphere 57.0
1938 Female, age 85, left hemisphere 56.0
2686 Male, age 75, right hemisphere 55.5
2613 Female, age 94, left hemisphere 55.0
2764 Male, age 80, right hemisphere 52.5
Hippocampus, CA1
nTPM: 57.1
1873 Female, age 85, both hemispheres 60.2
2749 Male, age 80, left hemisphere 59.2
2527 Male, age 74, both hemispheres 57.3
2045 Male, age 76, both hemispheres 56.2
2082 Female, age 91, right hemisphere 52.8
Hippocampus, CA2
nTPM: 55.9
1892 Male, age 76, both hemispheres 59.8
1940 Female, age 85, left hemisphere 56.5
2249 Male, age 74, both hemispheres 55.9
2437 Female, age 94, left hemisphere 55.9
2113 Female, age 91, right hemisphere 53.8
1963 Male, age 80, left hemisphere 53.3
Hippocampus, CA3
nTPM: 56.4
2137 Male, age 80, left hemisphere 58.9
1867 Male, age 76, both hemispheres 57.1
2436 Male, age 74, both hemispheres 57.0
1891 Female, age 85, both hemispheres 56.1
2620 Female, age 94, left hemisphere 54.8
2861 Female, age 67, both hemispheres 54.6
Parahippocampal cortex
nTPM: 58.1
2692 Male, age 74, both hemispheres 65.0
2622 Female, age 67, right hemisphere 62.4
1850 Male, age 80, both hemispheres 62.0
2018 Male, age 76, both hemispheres 57.9
2693 Female, age 94, both hemispheres 57.6
2532 Female, age 72, left hemisphere 57.3
2245 Female, age 91, both hemispheres 55.7
1933 Female, age 85, both hemispheres 55.5
1990 Female, age 91, right hemisphere 54.3
2250 Female, age 67, right hemisphere 52.9
Perirhinal gyrus
nTPM: 58.6
1794 Male, age 80, right hemisphere 61.8
1841 Female, age 85, right hemisphere 59.4
2521 Female, age 94, right hemisphere 58.0
2848 Male, age 76, right hemisphere 57.4
1847 Female, age 91, left hemisphere 56.4
Subiculum
nTPM: 59.5
2619 Male, age 74, both hemispheres 70.0
2438 Female, age 94, left hemisphere 63.0
1901 Male, age 80, both hemispheres 57.3
2729 Female, age 91, right hemisphere 56.7
1977 Female, age 85, both hemispheres 55.2
2042 Male, age 76, both hemispheres 54.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 64.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 64.1
Samples: 197

Max nTPM: 126.3
Min nTPM: 28.2
Std nTPM: 15.6
Median nTPM: 63.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 126.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 120.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 103.9
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 101.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 98.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 97.3
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 95.8
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 92.6
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 92.1
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 92.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 88.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 100.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 100.8
FF:10153-102I9 76 years, female 110.6
FF:10169-103B7 60 years, female 91.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 28.2
Samples: 4

Max nTPM: 32.3
Min nTPM: 21.2
Sample A Female 32.3
Sample B Female 29.6
Sample C Male 29.6
Sample D Male 21.2
Entorhinal cortex
nTPM: 26.5
Samples: 4

Max nTPM: 34.3
Min nTPM: 19.0
Sample A Female 24.4
Sample B Female 34.3
Sample C Male 28.3
Sample D Male 19.0
Subiculum
nTPM: 25.1
Samples: 4

Max nTPM: 28.3
Min nTPM: 21.3
Sample A Female 28.3
Sample B Female 27.1
Sample C Male 23.7
Sample D Male 21.3
Ventral hippocampus
nTPM: 25.1
Samples: 4

Max nTPM: 28.2
Min nTPM: 19.8
Sample A Female 26.1
Sample B Female 19.8
Sample C Male 28.2
Sample D Male 26.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 35.2
Samples: 4

Max nTPM: 36.7
Min nTPM: 33.9
Sample A Male 33.9
Sample B Male 34.4
Sample C Female 35.7
Sample D Female 36.7
Hippocampal formation
nTPM: 38.4
Samples: 4

Max nTPM: 39.9
Min nTPM: 37.3
Sample A Male 39.9
Sample B Male 39.0
Sample C Female 37.5
Sample D Female 37.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.7
67881775 Antisense, RP_040920_02_H02, Mouse strain C57BL/6J (56 days, male) 9.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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