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AMYGDALA - Expression summary
Mouse brain, Intensity
Amygdalai 		81.170
RNA expressioni
Consensus:24.1 nTPM
HPA:24.1 nTPM
GTEx:22.3 nTPM
FANTOM5:127.0 Scaled Tags Per Million
Pig:41.5 nTPM
Mouse:56.2 nTPM
Allen mouse:3.6 Expression energy

AMYGDALA - Mouse brain profilei , antibody HPA019002
Amygdala mean intensity 81.170
intensityi
FRONT BACK
Nucleus of the lateral olfactory tract 81.170
Basal medial amygdaloid nucleus 47.225
Basal lateral amygdala* -
Basal lateral amygdaloid nucleus 48.025
Cortical amygdala 46.233
Central amygdala 43.165
Medial amygdaloid nucleus 45.332

AMYGDALA - HPA Brain RNA-seq
Max nTPM 24.1
Sample id Sample description nTPM
Amygdala
nTPM: 21.8
2695 Female, age 67, right hemisphere 25.7
2514 Male, age 75, right hemisphere 24.9
2814 Male, age 76, right hemisphere 20.7
1987 Female, age 91, left hemisphere 19.0
2517 Female, age 94, left hemisphere 18.9
Basal amygdala
nTPM: 18.7
2243 Female, age 91, right hemisphere 22.0
2110 Male, age 80, left hemisphere 19.1
2685 Female, age 94, left hemisphere 19.0
2609 Male, age 75, right hemisphere 18.9
1955 Male, age 76, both hemispheres 17.0
2827 Female, age 67, right hemisphere 16.4
Central amygdala
nTPM: 21.8
2826 Female, age 94, left hemisphere 25.9
2701 Female, age 91, right hemisphere 21.8
2515 Male, age 75, right hemisphere 21.7
1905 Male, age 76, both hemispheres 19.7
2239 Male, age 80, left hemisphere 19.6
Corticomedial amygdala
nTPM: 20.8
2428 Male, age 75, right hemisphere 25.9
2240 Male, age 76, both hemispheres 23.1
2429 Female, age 94, left hemisphere 20.2
2242 Female, age 91, right hemisphere 19.0
2829 Male, age 80, left hemisphere 18.9
2535 Female, age 67, right hemisphere 17.7
Lateral amygdala
nTPM: 21.3
2830 Female, age 67, right hemisphere 28.3
2516 Male, age 75, right hemisphere 23.3
2534 Female, age 94, left hemisphere 21.2
1883 Male, age 76, both hemispheres 19.8
2256 Male, age 80, left hemisphere 18.9
2255 Female, age 91, right hemisphere 16.2
Stria terminalis, bed nucleus
nTPM: 24.1
2486 Female, age 94, both hemispheres 25.5
1974 Female, age 91, both hemispheres 23.9
2201 Male, age 74, unknown 22.7

AMYGDALA - GTEx RNA-seqi
Average nTPM 22.3
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 22.3
Samples: 152

Max nTPM: 48.2
Min nTPM: 13.2
Std nTPM: 4.5
Median nTPM: 21.8
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 48.2
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 37.6
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 33.1
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 32.3
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 30.9
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 30.6
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 30.6
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 29.9
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 29.7
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 29.7
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 29.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 127.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 127.0
FF:10151-102I7 76 years, female 127.0

AMYGDALA - Pig RNA-seqi
Average nTPM 41.5
Pig sample Sample description nTPM
Amygdala
nTPM: 41.5
Samples: 4

Max nTPM: 49.1
Min nTPM: 35.8
Sample A Female 49.1
Sample B Female 42.2
Sample C Male 35.8
Sample D Male 39.0

AMYGDALA - Mouse RNA-seqi
Average nTPM 56.2
Mouse sample Sample description nTPM
Amygdala
nTPM: 56.2
Samples: 4

Max nTPM: 59.3
Min nTPM: 53.6
Sample A Male 59.3
Sample B Male 53.6
Sample C Female 55.3
Sample D Female 56.6

AMYGDALA - Allen Mouse ISHi
Max Expression energy 3.6
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 3.6
69735502 Antisense, RP_050503_02_H11, Mouse strain C57BL/6J (56 days, male) 3.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.