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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		83.733
RNA expressioni
Consensus:23.2 nTPM
HPA:23.2 nTPM
GTEx:22.4 nTPM
FANTOM5:183.8 Scaled Tags Per Million
Pig:55.7 nTPM
Mouse:64.9 nTPM
Allen mouse:5.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA019002
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA019002
Hippocampal formation mean intensity 83.733
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 43.339
Molecular layer of the dentate gyrus 38.980
Granular dentate gyrus 52.669
CA1 - oriens layer 50.848
CA1 - pyramidal layer 59.390
CA1 - radiatum layer 42.307
CA2 - oriens layer 52.033
CA2 - pyramidal layer 61.108
CA2 - radiatum layer 42.770
CA3 - oriens layer 52.091
CA3 - pyramidal layer 76.467
CA3 - radiatum layer 49.834
Stratum lucidum 44.770
Lacunosum moleculare 64.185
Subiculum 83.733

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.2
Sample id Sample description nTPM
Hippocampus
nTPM: 19.4
1898 Male, age 80, left hemisphere 23.5
1911 Female, age 85, right hemisphere 21.2
2621 Female, age 67, right hemisphere 20.8
1855 Male, age 76, left hemisphere 18.1
2148 Female, age 91, left hemisphere 16.4
2529 Female, age 94, left hemisphere 16.4
Dentate gyrus
nTPM: 21.6
2010 Male, age 76, both hemispheres 26.4
2246 Female, age 85, both hemispheres 22.2
1927 Female, age 91, both hemispheres 21.8
2530 Female, age 94, left hemisphere 21.0
2528 Male, age 74, both hemispheres 19.6
2531 Female, age 67, both hemispheres 18.4
Entorhinal gyrus
nTPM: 19.2
1787 Male, age 76, left hemisphere 22.6
1938 Female, age 85, left hemisphere 21.5
2764 Male, age 80, right hemisphere 18.8
2686 Male, age 75, right hemisphere 18.5
2117 Female, age 91, right hemisphere 17.4
2613 Female, age 94, left hemisphere 16.4
Hippocampus, CA1
nTPM: 21.6
2749 Male, age 80, left hemisphere 25.6
1873 Female, age 85, both hemispheres 22.5
2045 Male, age 76, both hemispheres 20.8
2527 Male, age 74, both hemispheres 20.2
2082 Female, age 91, right hemisphere 19.1
Hippocampus, CA2
nTPM: 19.8
1892 Male, age 76, both hemispheres 25.2
1940 Female, age 85, left hemisphere 20.3
2113 Female, age 91, right hemisphere 19.7
2437 Female, age 94, left hemisphere 19.7
2249 Male, age 74, both hemispheres 17.2
1963 Male, age 80, left hemisphere 16.9
Hippocampus, CA3
nTPM: 20.4
2137 Male, age 80, left hemisphere 23.5
1867 Male, age 76, both hemispheres 23.1
1891 Female, age 85, both hemispheres 23.0
2436 Male, age 74, both hemispheres 21.3
2620 Female, age 94, left hemisphere 17.8
2861 Female, age 67, both hemispheres 13.4
Parahippocampal cortex
nTPM: 20.3
1850 Male, age 80, both hemispheres 27.3
1990 Female, age 91, right hemisphere 22.3
2693 Female, age 94, both hemispheres 20.8
2018 Male, age 76, both hemispheres 20.7
1933 Female, age 85, both hemispheres 19.8
2692 Male, age 74, both hemispheres 19.6
2622 Female, age 67, right hemisphere 18.8
2245 Female, age 91, both hemispheres 18.7
2532 Female, age 72, left hemisphere 17.8
2250 Female, age 67, right hemisphere 17.4
Perirhinal gyrus
nTPM: 23.2
1794 Male, age 80, right hemisphere 26.6
1841 Female, age 85, right hemisphere 23.4
2848 Male, age 76, right hemisphere 23.0
1847 Female, age 91, left hemisphere 22.6
2521 Female, age 94, right hemisphere 20.3
Subiculum
nTPM: 20.4
1977 Female, age 85, both hemispheres 23.1
2438 Female, age 94, left hemisphere 21.1
1901 Male, age 80, both hemispheres 20.4
2729 Female, age 91, right hemisphere 20.1
2619 Male, age 74, both hemispheres 19.7
2042 Male, age 76, both hemispheres 17.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.4
Samples: 197

Max nTPM: 40.2
Min nTPM: 14.7
Std nTPM: 4.6
Median nTPM: 21.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 40.2
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 36.6
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 36.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 34.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 34.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 34.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 32.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 32.7
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 31.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 31.6
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 31.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 183.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 183.8
FF:10169-103B7 60 years, female 242.7
FF:10153-102I9 76 years, female 125.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 55.7
Samples: 4

Max nTPM: 66.1
Min nTPM: 44.9
Sample A Female 66.1
Sample B Female 53.9
Sample C Male 57.9
Sample D Male 44.9
Entorhinal cortex
nTPM: 49.8
Samples: 4

Max nTPM: 55.4
Min nTPM: 42.6
Sample A Female 52.6
Sample B Female 55.4
Sample C Male 48.5
Sample D Male 42.6
Subiculum
nTPM: 49.3
Samples: 4

Max nTPM: 62.6
Min nTPM: 44.2
Sample A Female 62.6
Sample B Female 45.2
Sample C Male 45.0
Sample D Male 44.2
Ventral hippocampus
nTPM: 49.1
Samples: 4

Max nTPM: 57.1
Min nTPM: 40.8
Sample A Female 57.1
Sample B Female 40.8
Sample C Male 47.0
Sample D Male 51.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 64.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.9
Samples: 4

Max nTPM: 69.8
Min nTPM: 60.9
Sample A Male 60.9
Sample B Male 63.9
Sample C Female 65.1
Sample D Female 69.8
Hippocampal formation
nTPM: 63.8
Samples: 4

Max nTPM: 68.8
Min nTPM: 58.1
Sample A Male 62.4
Sample B Male 65.9
Sample C Female 68.8
Sample D Female 58.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.1
69735502 Antisense, RP_050503_02_H11, Mouse strain C57BL/6J (56 days, male) 5.1

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