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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:44.6 nTPM
HPA:44.6 nTPM
GTEx:44.5 nTPM
FANTOM5:38.5 Scaled Tags Per Million
Pig:6.9 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006764Antibody HPA007244
Glial cells LowLow
Neuronal cells MediumHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 44.6
Sample id Sample description nTPM
Hippocampus
nTPM: 44.6
1898 Male, age 80, left hemisphere 48.2
2529 Female, age 94, left hemisphere 47.5
1855 Male, age 76, left hemisphere 43.8
1911 Female, age 85, right hemisphere 43.4
2148 Female, age 91, left hemisphere 42.9
2621 Female, age 67, right hemisphere 41.8
Dentate gyrus
nTPM: 42.0
2528 Male, age 74, both hemispheres 45.7
2010 Male, age 76, both hemispheres 43.1
2530 Female, age 94, left hemisphere 43.1
2246 Female, age 85, both hemispheres 41.0
1927 Female, age 91, both hemispheres 40.2
2531 Female, age 67, both hemispheres 38.8
Entorhinal gyrus
nTPM: 43.1
2117 Female, age 91, right hemisphere 46.8
2764 Male, age 80, right hemisphere 45.7
1938 Female, age 85, left hemisphere 42.7
1787 Male, age 76, left hemisphere 41.6
2686 Male, age 75, right hemisphere 41.0
2613 Female, age 94, left hemisphere 40.7
Hippocampus, CA1
nTPM: 43.5
2749 Male, age 80, left hemisphere 47.6
2527 Male, age 74, both hemispheres 45.6
1873 Female, age 85, both hemispheres 43.6
2082 Female, age 91, right hemisphere 41.1
2045 Male, age 76, both hemispheres 39.7
Hippocampus, CA2
nTPM: 43.7
2249 Male, age 74, both hemispheres 47.8
1963 Male, age 80, left hemisphere 46.4
1892 Male, age 76, both hemispheres 42.5
2113 Female, age 91, right hemisphere 42.5
1940 Female, age 85, left hemisphere 41.6
2437 Female, age 94, left hemisphere 41.4
Hippocampus, CA3
nTPM: 42.6
2436 Male, age 74, both hemispheres 45.8
1867 Male, age 76, both hemispheres 43.9
1891 Female, age 85, both hemispheres 42.7
2620 Female, age 94, left hemisphere 41.9
2137 Male, age 80, left hemisphere 41.2
2861 Female, age 67, both hemispheres 39.9
Parahippocampal cortex
nTPM: 41.7
2692 Male, age 74, both hemispheres 43.3
1990 Female, age 91, right hemisphere 42.7
1933 Female, age 85, both hemispheres 42.6
2018 Male, age 76, both hemispheres 42.4
2245 Female, age 91, both hemispheres 42.4
1850 Male, age 80, both hemispheres 41.9
2250 Female, age 67, right hemisphere 41.8
2532 Female, age 72, left hemisphere 41.0
2622 Female, age 67, right hemisphere 40.3
2693 Female, age 94, both hemispheres 38.5
Perirhinal gyrus
nTPM: 42.1
1794 Male, age 80, right hemisphere 43.4
1847 Female, age 91, left hemisphere 43.3
2521 Female, age 94, right hemisphere 42.2
1841 Female, age 85, right hemisphere 42.0
2848 Male, age 76, right hemisphere 39.5
Subiculum
nTPM: 44.1
1901 Male, age 80, both hemispheres 45.5
1977 Female, age 85, both hemispheres 45.0
2619 Male, age 74, both hemispheres 44.6
2729 Female, age 91, right hemisphere 44.1
2042 Male, age 76, both hemispheres 43.8
2438 Female, age 94, left hemisphere 41.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.5
Samples: 197

Max nTPM: 75.1
Min nTPM: 22.7
Std nTPM: 9.6
Median nTPM: 44.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 75.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 74.4
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 72.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 68.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 66.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 63.8
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 63.1
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 62.5
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 60.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 60.1
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 58.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.5
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 36.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.8
Samples: 4

Max nTPM: 8.8
Min nTPM: 5.6
Sample A Female 8.8
Sample B Female 6.7
Sample C Male 6.2
Sample D Male 5.6
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 6.5
Min nTPM: 5.0
Sample A Female 5.7
Sample B Female 6.5
Sample C Male 6.1
Sample D Male 5.0
Subiculum
nTPM: 6.5
Samples: 4

Max nTPM: 7.1
Min nTPM: 6.2
Sample A Female 7.1
Sample B Female 6.5
Sample C Male 6.2
Sample D Male 6.3
Ventral hippocampus
nTPM: 6.9
Samples: 4

Max nTPM: 8.6
Min nTPM: 5.4
Sample A Female 6.9
Sample B Female 5.4
Sample C Male 8.6
Sample D Male 6.8

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.