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ACAA1
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:50.4 nTPM
HPA:50.4 nTPM
GTEx:63.7 nTPM
FANTOM5:60.5 Scaled Tags Per Million
Pig:7.6 nTPM

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 50.4
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 48.3
2828 Female, age 72, unknown 51.7
2019 Male, age 18, unknown 50.7
2411 Female, age 72, unknown 50.6
1870 Female, age 42, unknown 49.4
2586 Male, age 75, left hemisphere 47.9
1830 Male, age 51, unknown 47.8
1833 Male, age 53, unknown 47.4
1827 Male, age 72, unknown 46.8
2219 Male, age 76, both hemispheres 46.3
2666 Male, age 74, left hemisphere 44.5
Dorsal raphe nucleus
nTPM: 48.6
1828 Male, age 53, unknown 50.7
2750 Male, age 76, both hemispheres 49.3
2298 Female, age 72, unknown 48.2
2016 Female, age 72, unknown 47.9
2047 Male, age 72, unknown 46.9
Inferior colliculus
nTPM: 46.6
2097 Female, age 72, unknown 47.7
1848 Female, age 42, unknown 47.1
1890 Male, age 53, unknown 46.7
2849 Male, age 72, unknown 45.1
Median raphe nucleus
nTPM: 44.8
2220 Male, age 76, midline 44.8
Pedunculopontine tegmental nucleus
nTPM: 47.6
2338 Male, age 61, both hemispheres 49.3
2334 Male, age 80, both hemispheres 47.8
1921 Female, age 85, both hemispheres 45.7
Periaquaductal grey, anterior
nTPM: 45.7
2502 Female, age 75, unknown 47.7
1795 Male, age 51, unknown 45.1
1947 Male, age 18, unknown 44.3
Periaquaductal grey, dorsal
nTPM: 45.1
2850 Male, age 76, both hemispheres 45.9
2464 Female, age 72, unknown 45.8
1840 Male, age 53, unknown 44.6
1831 Male, age 72, unknown 43.9
Periaquaductal grey, lateral
nTPM: 45.4
2140 Male, age 76, both hemispheres 46.3
2272 Male, age 74, both hemispheres 45.2
2053 Male, age 18, unknown 44.5
Pretectal area
nTPM: 47.1
1817 Female, age 42, unknown 49.3
2316 Male, age 76, right hemisphere 49.0
2007 Male, age 72, unknown 48.7
2667 Female, age 75, unknown 48.2
2273 Male, age 74, both hemispheres 48.1
1944 Female, age 72, unknown 47.9
1815 Male, age 53, unknown 47.8
1816 Male, age 51, unknown 46.0
2224 Female, age 72, unknown 45.3
2825 Male, age 18, unknown 44.7
2407 Male, age 75, both hemispheres 43.4
Red nucleus
nTPM: 50.4
2503 Female, age 72, unknown 54.6
1904 Male, age 53, unknown 53.0
2769 Male, age 72, unknown 52.7
1821 Female, age 72, unknown 52.0
2227 Male, age 72, unknown 52.0
2785 Male, age 18, unknown 51.9
1865 Male, age 51, unknown 50.8
2823 Male, age 76, right hemisphere 50.7
1954 Female, age 42, unknown 50.5
2725 Female, age 75, unknown 47.8
2588 Male, age 74, left hemisphere 46.9
2584 Male, age 75, left hemisphere 42.1
Substantia nigra
nTPM: 49.8
1916 Female, age 42, unknown 57.5
1851 Male, age 51, unknown 54.5
2699 Male, age 18, unknown 53.7
2409 Female, age 72, unknown 49.3
2241 Male, age 72, unknown 49.1
1889 Female, age 72, unknown 48.6
1941 Male, age 53, unknown 48.6
2590 Female, age 75, unknown 47.2
2665 Male, age 74, both hemispheres 45.9
2583 Male, age 75, right hemisphere 44.0
Superior colliculus
nTPM: 47.3
1913 Female, age 42, unknown 48.6
2668 Female, age 75, unknown 48.4
1995 Male, age 72, unknown 48.3
1796 Male, age 53, unknown 47.9
1895 Male, age 76, right hemisphere 47.6
2087 Female, age 72, unknown 47.5
2587 Male, age 74, left hemisphere 47.4
1839 Male, age 51, unknown 46.6
2664 Male, age 75, both hemispheres 45.8
2261 Male, age 18, unknown 45.3
Ventral tegmental area
nTPM: 50.0
2410 Female, age 72, unknown 54.6
1915 Female, age 42, unknown 54.2
2223 Female, age 72, unknown 49.6
1942 Male, age 51, unknown 47.8
2218 Male, age 76, both hemispheres 47.6
2021 Male, age 53, unknown 46.0

MIDBRAIN - GTEx RNA-seqi
Average nTPM 63.7
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 63.7
Samples: 139

Max nTPM: 139.1
Min nTPM: 31.9
Std nTPM: 17.9
Median nTPM: 60.9
GTEX-1RLM8-0011-R2a-SM-EZ6N4 50-59 years, male 139.1
GTEX-1H1ZS-0011-R2b-SM-CL54Q 70-79 years, male 126.2
GTEX-1I1GS-0011-R2b-SM-CMKHG 60-69 years, male 123.2
GTEX-13SLW-0011-R2b-SM-5O9C6 70-79 years, male 120.5
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 106.5
GTEX-13OVJ-0011-R2b-SM-5L3GP 50-59 years, female 106.4
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 100.2
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 100.1
GTEX-1GZ2Q-0011-R2b-SM-9OSWO 40-49 years, male 93.0
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 92.5
GTEX-13X6K-0011-R2b-SM-5P9K3 60-69 years, female 91.6
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 60.5
FF:10158-103A5 76 years, female 60.5

MIDBRAIN - Pig RNA-seqi
Average nTPM 7.6
Pig sample Sample description nTPM
Midbrain
nTPM: 7.6
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.2
Sample A Female 8.5
Sample B Female 7.8
Sample C Male 7.8
Sample D Male 6.2
Periaqueductal gray
nTPM: 7.2
Samples: 3

Max nTPM: 8.4
Min nTPM: 6.2
Sample B Female 7.0
Sample C Male 8.4
Sample D Male 6.2
Substantia nigra
nTPM: 7.6
Samples: 4

Max nTPM: 8.5
Min nTPM: 6.7
Sample A Female 8.2
Sample B Female 6.8
Sample C Male 8.5
Sample D Male 6.7
Superior colliculi
nTPM: 7.6
Samples: 4

Max nTPM: 8.4
Min nTPM: 6.5
Sample A Female 7.5
Sample B Female 8.4
Sample C Male 7.9
Sample D Male 6.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.