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SDR39U1
AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:55.4 nTPM
HPA:55.4 nTPM
GTEx:59.3 nTPM
FANTOM5:40.2 Scaled Tags Per Million
Pig:11.3 nTPM
Mouse:60.1 nTPM
Allen mouse:0.5 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 55.4
Sample id Sample description nTPM
Amygdala
nTPM: 55.4
2814 Male, age 76, right hemisphere 59.3
2695 Female, age 67, right hemisphere 57.2
1987 Female, age 91, left hemisphere 54.0
2517 Female, age 94, left hemisphere 54.0
2514 Male, age 75, right hemisphere 52.6
Basal amygdala
nTPM: 52.7
2609 Male, age 75, right hemisphere 57.1
1955 Male, age 76, both hemispheres 53.9
2243 Female, age 91, right hemisphere 53.4
2110 Male, age 80, left hemisphere 52.4
2827 Female, age 67, right hemisphere 50.8
2685 Female, age 94, left hemisphere 49.0
Central amygdala
nTPM: 54.8
1905 Male, age 76, both hemispheres 58.9
2515 Male, age 75, right hemisphere 56.2
2826 Female, age 94, left hemisphere 55.6
2239 Male, age 80, left hemisphere 52.8
2701 Female, age 91, right hemisphere 50.4
Corticomedial amygdala
nTPM: 53.3
2428 Male, age 75, right hemisphere 58.2
2829 Male, age 80, left hemisphere 54.3
2535 Female, age 67, right hemisphere 53.4
2429 Female, age 94, left hemisphere 51.5
2240 Male, age 76, both hemispheres 51.2
2242 Female, age 91, right hemisphere 51.0
Lateral amygdala
nTPM: 54.6
2516 Male, age 75, right hemisphere 57.7
1883 Male, age 76, both hemispheres 56.0
2534 Female, age 94, left hemisphere 54.5
2256 Male, age 80, left hemisphere 53.5
2255 Female, age 91, right hemisphere 53.3
2830 Female, age 67, right hemisphere 52.5
Stria terminalis, bed nucleus
nTPM: 50.5
1974 Female, age 91, both hemispheres 51.3
2201 Male, age 74, unknown 50.7
2486 Female, age 94, both hemispheres 49.4

AMYGDALA - GTEx RNA-seqi
Average nTPM 59.3
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 59.3
Samples: 152

Max nTPM: 99.3
Min nTPM: 26.5
Std nTPM: 13.2
Median nTPM: 57.2
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 99.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 95.6
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 87.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 85.4
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 85.1
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 83.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 81.7
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 81.1
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 81.0
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 80.1
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 78.9
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 40.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 40.2
FF:10151-102I7 76 years, female 40.2

AMYGDALA - Pig RNA-seqi
Average nTPM 11.3
Pig sample Sample description nTPM
Amygdala
nTPM: 11.3
Samples: 4

Max nTPM: 15.1
Min nTPM: 9.0
Sample A Female 15.1
Sample B Female 9.0
Sample C Male 10.3
Sample D Male 10.7

AMYGDALA - Mouse RNA-seqi
Average nTPM 60.1
Mouse sample Sample description nTPM
Amygdala
nTPM: 60.1
Samples: 4

Max nTPM: 62.4
Min nTPM: 58.1
Sample A Male 58.1
Sample B Male 59.7
Sample C Female 62.4
Sample D Female 60.0

AMYGDALA - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 0.5
100144110 Antisense, RP_110407_03_A09, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.