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AMYGDALA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:41.3 nTPM
HPA:41.3 nTPM
GTEx:31.7 nTPM
FANTOM5:95.5 Scaled Tags Per Million
Pig:54.6 nTPM
Mouse:45.6 nTPM
Allen mouse:4.4 Expression energy

AMYGDALA - Annotated protein expression
Pending normal tissue analysis

AMYGDALA - HPA Brain RNA-seq
Max nTPM 41.3
Sample id Sample description nTPM
Amygdala
nTPM: 41.3
2695 Female, age 67, right hemisphere 49.4
2814 Male, age 76, right hemisphere 44.3
2514 Male, age 75, right hemisphere 39.5
2517 Female, age 94, left hemisphere 38.4
1987 Female, age 91, left hemisphere 35.0
Basal amygdala
nTPM: 38.5
2609 Male, age 75, right hemisphere 48.6
2110 Male, age 80, left hemisphere 39.1
1955 Male, age 76, both hemispheres 37.7
2827 Female, age 67, right hemisphere 35.6
2243 Female, age 91, right hemisphere 35.1
2685 Female, age 94, left hemisphere 34.8
Central amygdala
nTPM: 39.6
2515 Male, age 75, right hemisphere 45.5
1905 Male, age 76, both hemispheres 43.1
2826 Female, age 94, left hemisphere 38.1
2239 Male, age 80, left hemisphere 37.6
2701 Female, age 91, right hemisphere 33.7
Corticomedial amygdala
nTPM: 36.1
2428 Male, age 75, right hemisphere 46.3
2829 Male, age 80, left hemisphere 42.5
2240 Male, age 76, both hemispheres 34.3
2242 Female, age 91, right hemisphere 32.6
2429 Female, age 94, left hemisphere 31.3
2535 Female, age 67, right hemisphere 29.7
Lateral amygdala
nTPM: 40.9
2516 Male, age 75, right hemisphere 53.6
1883 Male, age 76, both hemispheres 43.8
2256 Male, age 80, left hemisphere 39.7
2830 Female, age 67, right hemisphere 38.9
2534 Female, age 94, left hemisphere 35.3
2255 Female, age 91, right hemisphere 34.4
Stria terminalis, bed nucleus
nTPM: 31.9
2201 Male, age 74, unknown 33.8
1974 Female, age 91, both hemispheres 31.9
2486 Female, age 94, both hemispheres 30.1

AMYGDALA - GTEx RNA-seqi
Average nTPM 31.7
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 31.7
Samples: 152

Max nTPM: 51.6
Min nTPM: 8.9
Std nTPM: 6.1
Median nTPM: 31.8
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 51.6
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 50.2
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 44.3
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 43.5
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 43.5
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 41.1
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 41.0
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 40.7
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 40.1
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 39.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 39.6
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AMYGDALA - FANTOM5 CAGEi
Max Scaled Tags Per Million 95.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 95.5
FF:10151-102I7 76 years, female 95.5

AMYGDALA - Pig RNA-seqi
Average nTPM 54.6
Pig sample Sample description nTPM
Amygdala
nTPM: 54.6
Samples: 4

Max nTPM: 58.7
Min nTPM: 51.8
Sample A Female 58.7
Sample B Female 51.8
Sample C Male 51.9
Sample D Male 56.1

AMYGDALA - Mouse RNA-seqi
Average nTPM 45.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 45.6
Samples: 4

Max nTPM: 49.0
Min nTPM: 42.5
Sample A Male 43.8
Sample B Male 49.0
Sample C Female 47.0
Sample D Female 42.5

AMYGDALA - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.4
67815944 Antisense, RP_040920_02_B08, Mouse strain C57BL/6J (56 days, male) 8.5
70919782 Antisense, RP_050713_02_A09, Mouse strain C57BL/6J (56 days, male) 0.3

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.