Brain tissue expression of CIPC in retina

RETINA - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

Consensus:	41.2	nTPM
GTEx:	41.2	nTPM
FANTOM5:	58.2	Scaled Tags Per Million

Pig:	28.3	nTPM
Mouse:	44.5	nTPM

RETINA - Annotated protein expression
Pending normal tissue analysis

RETINA - GTEx RNA-seqⁱ

Average nTPM	41.2

GTEx sample id

Sample description

nTPM

Retina
Average nTPM: 41.2

Samples: 105

Max nTPM: 54.1
Min nTPM: 22.4
Std nTPM: 5.6
Median nTPM:

162_1	79 years, female	54.1
347_1	72 years, male	51.8
266_1	85 years, male	51.5
237_1	82 years, male	51.4
246_1	77 years, male	50.1
126_1	63 years, male	48.8
142_1	61 years, female	48.6
404_1	82 years, female	48.3
172_1	72 years, female	48.0
137_1	83 years, male	47.8
17_1	71 years, male	47.5
375_1	74 years, female	47.4
217_1	76 years, male	47.2
81_1	67 years, male	47.0
286_1	68 years, female	47.0
355_1	70 years, female	47.0
18_1	88 years, male	46.9
117_1	61 years, male	46.6
229_1	69 years, female	46.6
9_1	66 years, female	46.5
43_1	64 years, female	46.4
145_1	84 years, male	46.3
119_1	70 years, female	45.9
501_1	88 years, male	45.8
99_1	64 years, male	45.7
413_1	59 years, female	45.7
109_1	81 years, female	45.6
265_1	87 years, male	45.5
35_1	74 years, female	45.2
386_1	76 years, male	45.1
405_1	91 years, male	44.8
316_1	62 years, male	44.7
468_1	89 years, male	44.6
149_1	88 years, male	44.5
352_1	62 years, male	44.3
115_1	83 years, male	44.2
318_1	68 years, male	44.2
319_1	81 years, male	44.2
6_1	73 years, female	43.8
324_1	76 years, male	43.5
379_1	60 years, male	43.3
42_1	85 years, male	42.9
490_1	67 years, female	42.6
396_1	62 years, male	42.4
466_1	57 years, female	42.1
322_1	76 years, male	42.0
335_1	73 years, female	41.7
518_1	75 years, female	41.7
189_1	76 years, male	41.6
526_1	61 years, male	41.6
89_1	63 years, male	41.4
348_1	84 years, male	41.4
415_1	77 years, female	41.2
292_1	71 years, male	41.0
377_1	82 years, female	41.0
173_1	67 years, male	40.8
480_1	63 years, male	40.8
506_1	65 years, male	40.7
243_1	75 years, male	40.4
503_1	68 years, male	40.4
517_1	88 years, male	40.4
414_1	84 years, female	40.3
32_1	67 years, male	40.1
120_1	70 years, female	40.0
447_1	81 years, male	40.0
389_1	86 years, female	39.8
349_1	83 years, male	39.6
406_1	79 years, male	39.3
251_1	78 years, male	39.2
291_1	76 years, male	39.2
350_1	84 years, female	39.1
139_1	64 years, female	38.8
177_1	74 years, male	38.8
153_1	70 years, female	38.7
313_1	79 years, female	38.6
499_1	55 years, female	38.4
356_1	87 years, female	38.3
394_1	75 years, female	38.2
425_1	59 years, female	38.1
376_1	75 years, female	37.8
491_1	89 years, female	37.6
254_1	77 years, female	37.5
295_1	61 years, female	37.3
351_1	91 years, male	36.7
321_1	62 years, female	36.3
353_1	82 years, female	36.0
218_1	71 years, female	35.9
311_1	78 years, male	35.9
354_1	81 years, female	35.8
264_1	73 years, female	35.4
315_1	62 years, female	35.4
452_1	88 years, female	35.4
163_1	78 years, male	34.7
41_1	94 years, female	34.4
293_1	68 years, female	34.1
320_1	89 years, female	33.7
4_1	88 years, female	33.4
384_1	83 years, male	33.4
288_1	66 years, female	33.2
314_1	67 years, male	33.2
307_1	66 years, female	31.7
317_1	60 years, male	30.7
2_1	77 years, female	29.4
495_1	57 years, female	23.8
308_1	70 years, female	22.4
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RETINA - FANTOM5 CAGEⁱ

Max Scaled Tags Per Million	58.2

FANTOM5 sample id

Sample description

Scaled Tags Per Million

Retina
Scaled Tags Per Million: 58.2

FF:10030-101E3

24-65 years, mixed

58.2

RETINA - Pig RNA-seqⁱ

Average nTPM	28.3

Pig sample

Sample description

nTPM

Retina
nTPM: 28.3

Samples: 4

Max nTPM: 30.9
Min nTPM: 26.2

Sample A	Female	26.2
Sample B	Female	28.8
Sample C	Male	30.9
Sample D	Male	27.3

RETINA - Mouse RNA-seqⁱ

Average nTPM	44.5

Mouse sample

Sample description

nTPM

Retina
nTPM: 44.6

Samples: 4

Max nTPM: 47.8
Min nTPM: 41.0

Sample A	Male	45.8
Sample B	Male	43.6
Sample C	Female	41.0
Sample D	Female	47.8